RNA id: TU337793



Basic Information


Item Value
RNA id TU337793
length 214
lncRNA type intronic
GC content 0.42
exon number 2
gene id G297556
representative True

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 4591349 ~ 4591851 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTAAACGTGATAGCGCATGTTTACATTGAAGCTGCTAGTACCTCAGGGATGACGTGTTTTTGTAGGCAAAACCCGGAAGCGAGTTAGCATTTTAGGACTTCCGGTTCCATCGCCCCGAAGTTAATGGGTTTTTGCTAAATCGCCTGAAATAAGGTCTGTGGTTAACAAAGCCTCTAAATATTTTCACGTTTTGATCTATGACATAAAACACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU337697 lncRNA downstream 182055 4391661 ~ 4409294 (-) True G297465
TU337680 lncRNA downstream 279457 4310332 ~ 4311892 (-) True G297450
TU337666 lncRNA downstream 283749 4286108 ~ 4298868 (-) True G297436
TU337670 lncRNA downstream 310975 4278140 ~ 4280374 (-) True G297440
TU337668 lncRNA downstream 341096 4247403 ~ 4250253 (-) True G297438
TU337796 lncRNA upstream 3874 4595725 ~ 4595936 (-) True G297559
TU337798 lncRNA upstream 5186 4597037 ~ 4597378 (-) True G297561
TU337729 lncRNA upstream 27388 4619239 ~ 4619480 (-) True G297497
TU337828 lncRNA upstream 297248 4889099 ~ 4889337 (-) True G297584
TU337838 lncRNA upstream 318983 4910834 ~ 4911121 (-) True G297591
CI01000082_04476837_04498244.mRNA mRNA downstream 93105 4476363 ~ 4498244 (-) True CI01000082_04476837_04498244
CI01000082_04374470_04376138.mRNA mRNA downstream 212626 4374337 ~ 4378723 (-) True CI01000082_04374470_04376138
CI01000082_04332255_04333022.mRNA mRNA downstream 256990 4331305 ~ 4334359 (-) False CI01000082_04332255_04333022
CI01000082_04306692_04308566.mRNA mRNA downstream 282013 4306106 ~ 4309336 (-) False CI01000082_04306692_04308566
CI01000082_04166987_04239812.mRNA mRNA downstream 351537 4166065 ~ 4239812 (-) False CI01000082_04166987_04239812
CI01000082_04604289_04607362.mRNA mRNA upstream 11981 4603832 ~ 4607362 (-) True CI01000082_04604289_04607362
CI01000082_04610319_04618566.mRNA mRNA upstream 18349 4610200 ~ 4618566 (-) True CI01000082_04610319_04618566
CI01000082_04622132_04622407.mRNA mRNA upstream 29923 4621774 ~ 4622407 (-) True CI01000082_04622132_04622407
CI01000082_04638798_04678811.mRNA mRNA upstream 46772 4638623 ~ 4678811 (-) True CI01000082_04638798_04678811
CI01000082_04681028_04690500.mRNA mRNA upstream 89177 4681028 ~ 4690813 (-) True CI01000082_04681028_04690500
TU337655 other downstream 257906 4320510 ~ 4330129 (-) True G297430
TU337615 other downstream 582237 4006992 ~ 4009112 (-) True CI01000082_04002837_04008950
TU337365 other downstream 1260598 3329728 ~ 3330751 (-) True G297175
TU337243 other downstream 1752382 2837715 ~ 2838967 (-) True G297060
TU337115 other downstream 1949498 2638799 ~ 2641851 (-) True CI01000082_02639529_02641582
TU337727 other upstream 106351 4698202 ~ 4699483 (-) True CI01000082_04698358_04700580

Expression Profile