RNA id: TU337796



Basic Information


Item Value
RNA id TU337796
length 212
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G297559
representative True

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 4595725 ~ 4595936 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTAATGTACAATTCATACTTTCTTTGTTTTTGACTTTCTCTTGACTTTATTATTTGAATTAATTGTTTGTTAAGCCATGCATGATGTCTTAATAGTAAAGTTTGTCTTTGTCGGGAAAGGCAACAAGGCAGAGAAAATATATATTCACGATGAGGAGAAAGGAGAAGAACAAATAAGCTGTATACGGATCCCATTCCAAGTTATTTATTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU337793 lncRNA downstream 3874 4591349 ~ 4591851 (-) True G297556
TU337697 lncRNA downstream 186431 4391661 ~ 4409294 (-) True G297465
TU337680 lncRNA downstream 283833 4310332 ~ 4311892 (-) True G297450
TU337666 lncRNA downstream 288125 4286108 ~ 4298868 (-) True G297436
TU337670 lncRNA downstream 315351 4278140 ~ 4280374 (-) True G297440
TU337798 lncRNA upstream 1101 4597037 ~ 4597378 (-) True G297561
TU337729 lncRNA upstream 23303 4619239 ~ 4619480 (-) True G297497
TU337828 lncRNA upstream 293163 4889099 ~ 4889337 (-) True G297584
TU337838 lncRNA upstream 314898 4910834 ~ 4911121 (-) True G297591
CI01000082_04569902_04593680.mRNA mRNA downstream 116 4569741 ~ 4595609 (-) True CI01000082_04569902_04593680
CI01000082_04476837_04498244.mRNA mRNA downstream 97481 4476363 ~ 4498244 (-) True CI01000082_04476837_04498244
CI01000082_04374470_04376138.mRNA mRNA downstream 217002 4374337 ~ 4378723 (-) True CI01000082_04374470_04376138
CI01000082_04332255_04333022.mRNA mRNA downstream 261366 4331305 ~ 4334359 (-) False CI01000082_04332255_04333022
CI01000082_04306692_04308566.mRNA mRNA downstream 286389 4306106 ~ 4309336 (-) False CI01000082_04306692_04308566
CI01000082_04604289_04607362.mRNA mRNA upstream 7896 4603832 ~ 4607362 (-) True CI01000082_04604289_04607362
CI01000082_04610319_04618566.mRNA mRNA upstream 14264 4610200 ~ 4618566 (-) True CI01000082_04610319_04618566
CI01000082_04622132_04622407.mRNA mRNA upstream 25838 4621774 ~ 4622407 (-) True CI01000082_04622132_04622407
CI01000082_04638798_04678811.mRNA mRNA upstream 42687 4638623 ~ 4678811 (-) True CI01000082_04638798_04678811
CI01000082_04681028_04690500.mRNA mRNA upstream 85092 4681028 ~ 4690813 (-) True CI01000082_04681028_04690500
TU337655 other downstream 262282 4320510 ~ 4330129 (-) True G297430
TU337615 other downstream 586613 4006992 ~ 4009112 (-) True CI01000082_04002837_04008950
TU337365 other downstream 1264974 3329728 ~ 3330751 (-) True G297175
TU337243 other downstream 1756758 2837715 ~ 2838967 (-) True G297060
TU337115 other downstream 1953874 2638799 ~ 2641851 (-) True CI01000082_02639529_02641582
TU337727 other upstream 102266 4698202 ~ 4699483 (-) True CI01000082_04698358_04700580

Expression Profile