RNA id: TU337838


Basic Information

Item Value
RNA id TU337838
length 288
lncRNA type intronic
GC content 0.53
exon number 1
gene id G297591
representative True

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 4910834 ~ 4911121 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCAAACCATGACGTTCAGAGAGGGGAAGCTGGACTAGGTCAATCTCCACCCATGATGCCCAGAGAGGGGGACCTAAACTAGGTCAAACTCCATCCATGACGTTCAGACAGGGGGAACTGGACTAGGTCAAACTCCACCCATGACGTCCAGAGAGGGGAAGCTGGTCTAGGTCAAACTTCAACCATGACGTTCAGAGAGGGGAAGCTGGACTAGGTCAAACTCCATCCATGACGTTCAGACAGGGGGAACTGGACTAGGTCAAACTCCATCCATGACGTTCAGAGAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU337828 lncRNA downstream 21497 4889099 ~ 4889337 (-) True G297584
TU337729 lncRNA downstream 291354 4619239 ~ 4619480 (-) True G297497
TU337798 lncRNA downstream 313456 4597037 ~ 4597378 (-) True G297561
TU337796 lncRNA downstream 314898 4595725 ~ 4595936 (-) True G297559
TU337793 lncRNA downstream 318983 4591349 ~ 4591851 (-) True G297556
CI01000082_04894842_04902790.mRNA mRNA downstream 7704 4894812 ~ 4903130 (-) True CI01000082_04894842_04902790
CI01000082_04875809_04890737.mRNA mRNA downstream 19622 4875399 ~ 4891212 (-) True CI01000082_04875809_04890737
CI01000082_04849334_04853131.mRNA mRNA downstream 57651 4849161 ~ 4853183 (-) True CI01000082_04849334_04853131
CI01000082_04833935_04843617.mRNA mRNA downstream 66203 4833087 ~ 4844631 (-) True CI01000082_04833935_04843617
CI01000082_04821994_04831503.mRNA mRNA downstream 79226 4821760 ~ 4831608 (-) True CI01000082_04821994_04831503
CI01000082_04920158_04927769.mRNA mRNA upstream 8848 4919969 ~ 4928285 (-) True CI01000082_04920158_04927769
CI01000082_04974642_04975465.mRNA mRNA upstream 63428 4974549 ~ 4975465 (-) True CI01000082_04974642_04975465
CI01000082_04977290_04978405.mRNA mRNA upstream 65819 4976940 ~ 4978405 (-) True CI01000082_04977290_04978405
CI01000082_04980206_05029465.mRNA mRNA upstream 69085 4980206 ~ 5029547 (-) True CI01000082_04980206_05029465
CI01000082_05037757_05048211.mRNA mRNA upstream 126308 5037429 ~ 5048211 (-) True CI01000082_05037757_05048211
TU337727 other downstream 211351 4698202 ~ 4699483 (-) True CI01000082_04698358_04700580
TU337655 other downstream 577391 4320510 ~ 4330129 (-) True G297430
TU337615 other downstream 901722 4006992 ~ 4009112 (-) True CI01000082_04002837_04008950
TU337365 other downstream 1580083 3329728 ~ 3330751 (-) True G297175
TU337243 other downstream 2071867 2837715 ~ 2838967 (-) True G297060

Expression Profile