RNA id: CI01000086_02366362_02373059.mRNA


Basic Information

Item Value
RNA id CI01000086_02366362_02373059.mRNA
length 682
RNA type mRNA
GC content 0.46
exon number 4
gene id CI01000086_02366362_02373059
representative False

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2364331 ~ 2373059 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GACATTATCATCATCATCATCATGAGCAAGGAAGCCCGTCCGTCCTGGGACAGTCCTATGCAGTTTGTCCTGGCATGTGTGTCTTATGCAGTGGGACTTGGGAATGTCTGGCGTTTTCCGTATCTCTGCCAAATGCATGGAGGAGCTACGTTTCCATATGTGGTTCTGATCATCTATCTGATCCGTGGTGTGACTCTTCATGGAGCCTGGAACGGAGTGAAGTACATGTTCACGCCCAAGCTGGAGCAGCTGGCAAACCCTCAAACATGGATCAACGCTGCCACTCAGATCTTCTTCTCTCTGGGTTTGGGCTTCGGCTCTTTGATCGCTTTCGCCAGTTACAACCACCACAACAATAACTTTGAGAGGCAGGCCGTCGTCGTGTCACTCATCAACAGCTGCACGTCTGTGTTCGCCAGCATCGTGACCTTCTCCATCTACGGCTTTAAAGCCACGTTCAACTACGAAAGCTGTTTGGAAAGAATGAATGATCGTTCTCTCATTATTCCATCAAACATTAAACTGAATGTTGGCAGTCTGTTCATTTTACGATCTCTTGGCTTTTCACAGAATGTTTTAGGACATTAAACTGCCATCTATGGAGAATCATCCATCGATTATTAACAGAACTAAATGGAAAGAGAAGACCATGTTATGAAATCTGCACTGCAATTGCAAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU340163 lncRNA downstream 14985 2346302 ~ 2351283 (-) True G299616
TU340275 lncRNA downstream 32026 2334009 ~ 2334242 (-) True G299718
TU340274 lncRNA downstream 32728 2333275 ~ 2333540 (-) True G299717
TU340273 lncRNA downstream 33118 2332914 ~ 2333150 (-) True G299716
TU340266 lncRNA downstream 43473 2321826 ~ 2322795 (-) True G299711
TU340153 lncRNA upstream 7976 2381035 ~ 2385164 (-) True G299606
TU340297 lncRNA upstream 84068 2457127 ~ 2457340 (-) True G299734
TU340302 lncRNA upstream 90442 2463501 ~ 2463712 (-) True G299739
TU340328 lncRNA upstream 128073 2501132 ~ 2501412 (-) True G299765
TU340329 lncRNA upstream 128369 2501428 ~ 2501664 (-) True G299766
CI01000086_02192695_02193522.mRNA mRNA downstream 172502 2192635 ~ 2193766 (-) True CI01000086_02192695_02193522
CI01000086_02032793_02044182.mRNA mRNA downstream 322086 2032712 ~ 2044182 (-) True CI01000086_02032793_02044182
CI01000086_02018950_02030464.mRNA mRNA downstream 335743 2018820 ~ 2030525 (-) True CI01000086_02018950_02030464
CI01000086_01994840_02008387.mRNA mRNA downstream 357881 1994595 ~ 2008387 (-) True CI01000086_01994840_02008387
CI01000086_01948087_01983560.mRNA mRNA downstream 382708 1948007 ~ 1983560 (-) True CI01000086_01948087_01983560
CI01000086_02400288_02400580.mRNA mRNA upstream 26799 2399858 ~ 2400608 (-) True CI01000086_02400288_02400580
CI01000086_02403053_02403317.mRNA mRNA upstream 29813 2402872 ~ 2403317 (-) True CI01000086_02403053_02403317
CI01000086_02543856_02545475.mRNA mRNA upstream 169309 2542368 ~ 2545808 (-) True CI01000086_02543856_02545475
CI01000086_02610598_02642920.mRNA mRNA upstream 237508 2610567 ~ 2642920 (-) True CI01000086_02610598_02642920
CI01000086_02886112_02888612.mRNA mRNA upstream 512388 2885447 ~ 2890213 (-) True CI01000086_02886112_02888612
TU340104 other downstream 462849 1903205 ~ 1903419 (-) True G299570
TU340045 other downstream 671091 1668206 ~ 1695177 (-) False G299528
TU340046 other downstream 671091 1668206 ~ 1695177 (-) True G299528
TU339566 other downstream 1105031 1260539 ~ 1261237 (-) True G299111
TU339561 other downstream 1239470 1126738 ~ 1126798 (-) True G299107
TU340140 other upstream 492623 2865682 ~ 2868103 (-) False G299598
TU340143 other upstream 492623 2865682 ~ 2868103 (-) True G299598

Expression Profile