RNA id: CI01000086_02400288_02400580.mRNA


Basic Information

Item Value
RNA id CI01000086_02400288_02400580.mRNA
length 668
RNA type mRNA
GC content 0.41
exon number 2
gene id CI01000086_02400288_02400580
representative True

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2399858 ~ 2400608 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGGGAAACTCTTTCCACATCACAGTCCCATGAAAACCACAGCAGAGGATGTGACACTTGAGATTTTCTCCTCTGTTGCACAGTTTTTCAATCAGAAACTTGTGAAGAAGGCTGATCTAGTAGAAGTTGATTGGCCGGACTCAAGATCCCAAGGTCCGAAGTGGCTGCGTTTCGGATGTTCTTCAGTGGAAGTGCTTGATGGACTCGGAGAAAGACACCTGGATATGACGGACATGTGACCCCTGATTCAGGTCGGCCCTGAGCCATACTGAGAAGTGCCCTGTCTTTCATAACGCTTGACGCGGTTGTGTTTCCATTGGAGCCGTTTTCTCTCTCGATTCCCAGATGGACGAATGTCCTGTACATCTTGAGTCTTGTAGCAATATCTGTTAGATAAAGATTCACTGTAGCCTCTCACATGGTTCTCCATGATGTCTGAACATCTCAAGATCATTTACACAGGTGCATCATATGAACATTTAACGTTTTGTCTTGAGACAAATCTGGGCCTTAATTCAACACATTTTGGGTGAATCTCATCAAAACATGTCAGAAAGAGCTTTATCAGGTCAAAATCCGAATACTAAATTATATTTTGCATAAAGAAAAAAAGTCTGTTTTTGGGGAACATTAATGTAATGCAGTTATTTTGATTAAAATCAGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU340153 lncRNA downstream 14694 2381035 ~ 2385164 (-) True G299606
TU340163 lncRNA downstream 48575 2346302 ~ 2351283 (-) True G299616
TU340275 lncRNA downstream 65616 2334009 ~ 2334242 (-) True G299718
TU340274 lncRNA downstream 66318 2333275 ~ 2333540 (-) True G299717
TU340273 lncRNA downstream 66708 2332914 ~ 2333150 (-) True G299716
TU340297 lncRNA upstream 56519 2457127 ~ 2457340 (-) True G299734
TU340302 lncRNA upstream 62893 2463501 ~ 2463712 (-) True G299739
TU340328 lncRNA upstream 100524 2501132 ~ 2501412 (-) True G299765
TU340329 lncRNA upstream 100820 2501428 ~ 2501664 (-) True G299766
TU340334 lncRNA upstream 105582 2506190 ~ 2511270 (-) True G299770
CI01000086_02366362_02373059.mRNA mRNA downstream 26799 2366268 ~ 2373059 (-) False CI01000086_02366362_02373059
CI01000086_02192695_02193522.mRNA mRNA downstream 206092 2192635 ~ 2193766 (-) True CI01000086_02192695_02193522
CI01000086_02032793_02044182.mRNA mRNA downstream 355676 2032712 ~ 2044182 (-) True CI01000086_02032793_02044182
CI01000086_02018950_02030464.mRNA mRNA downstream 369333 2018820 ~ 2030525 (-) True CI01000086_02018950_02030464
CI01000086_01994840_02008387.mRNA mRNA downstream 391471 1994595 ~ 2008387 (-) True CI01000086_01994840_02008387
CI01000086_02403053_02403317.mRNA mRNA upstream 2264 2402872 ~ 2403317 (-) True CI01000086_02403053_02403317
CI01000086_02543856_02545475.mRNA mRNA upstream 141760 2542368 ~ 2545808 (-) True CI01000086_02543856_02545475
CI01000086_02610598_02642920.mRNA mRNA upstream 209959 2610567 ~ 2642920 (-) True CI01000086_02610598_02642920
CI01000086_02886112_02888612.mRNA mRNA upstream 484839 2885447 ~ 2890213 (-) True CI01000086_02886112_02888612
CI01000086_02893723_02895660.mRNA mRNA upstream 492813 2893421 ~ 2895833 (-) True CI01000086_02893723_02895660
TU340104 other downstream 496439 1903205 ~ 1903419 (-) True G299570
TU340045 other downstream 704681 1668206 ~ 1695177 (-) False G299528
TU340046 other downstream 704681 1668206 ~ 1695177 (-) True G299528
TU339566 other downstream 1138621 1260539 ~ 1261237 (-) True G299111
TU339561 other downstream 1273060 1126738 ~ 1126798 (-) True G299107
TU340140 other upstream 465074 2865682 ~ 2868103 (-) False G299598
TU340143 other upstream 465074 2865682 ~ 2868103 (-) True G299598

Expression Profile