Item | Value |
---|---|
RNA id | TU339829 |
length | 347 |
lncRNA type | inter_gene |
GC content | 0.45 |
exon number | 1 |
gene id | G299345 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000086 |
NCBI id | null |
chromosome length | 2920448 |
location | 1400935 ~ 1401281 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU339802 | lncRNA | downstream | 15435 | 1381191 ~ 1385500 (-) | True | G299323 |
TU339800 | lncRNA | downstream | 27746 | 1371011 ~ 1373189 (-) | True | G299322 |
TU339797 | lncRNA | downstream | 46586 | 1353406 ~ 1354349 (-) | True | G299321 |
TU339815 | lncRNA | downstream | 54055 | 1341443 ~ 1346880 (-) | False | G299331 |
TU339813 | lncRNA | downstream | 54152 | 1341443 ~ 1346783 (-) | False | G299331 |
TU339832 | lncRNA | upstream | 2406 | 1403687 ~ 1404260 (-) | True | G299348 |
TU339835 | lncRNA | upstream | 8257 | 1409538 ~ 1409853 (-) | True | G299351 |
TU339857 | lncRNA | upstream | 32524 | 1433805 ~ 1435707 (-) | True | G299373 |
TU339878 | lncRNA | upstream | 61763 | 1463044 ~ 1463405 (-) | True | G299394 |
TU339901 | lncRNA | upstream | 93890 | 1495171 ~ 1495919 (-) | True | G299414 |
CI01000086_01313364_01320865.mRNA | mRNA | downstream | 78921 | 1313022 ~ 1322014 (-) | True | CI01000086_01313364_01320865 |
CI01000086_01296658_01297947.mRNA | mRNA | downstream | 102876 | 1295830 ~ 1298059 (-) | True | CI01000086_01296658_01297947 |
CI01000086_01257926_01260025.mRNA | mRNA | downstream | 140910 | 1257926 ~ 1260025 (-) | False | CI01000086_01257926_01260025 |
CI01000086_01237966_01253245.mRNA | mRNA | downstream | 147647 | 1237911 ~ 1253288 (-) | True | CI01000086_01237966_01253245 |
CI01000086_01193934_01219331.mRNA | mRNA | downstream | 181495 | 1193715 ~ 1219440 (-) | True | CI01000086_01193934_01219331 |
CI01000086_01670242_01672517.mRNA | mRNA | upstream | 268507 | 1669788 ~ 1674496 (-) | True | CI01000086_01670242_01672517 |
CI01000086_01852638_01897719.mRNA | mRNA | upstream | 450865 | 1852146 ~ 1897719 (-) | False | CI01000086_01852638_01897719 |
CI01000086_01915013_01921794.mRNA | mRNA | upstream | 513732 | 1915013 ~ 1921794 (-) | True | CI01000086_01915013_01921794 |
CI01000086_01948087_01983560.mRNA | mRNA | upstream | 546726 | 1948007 ~ 1983560 (-) | True | CI01000086_01948087_01983560 |
CI01000086_01994840_02008387.mRNA | mRNA | upstream | 593314 | 1994595 ~ 2008387 (-) | True | CI01000086_01994840_02008387 |
TU339566 | other | downstream | 139698 | 1260539 ~ 1261237 (-) | True | G299111 |
TU339561 | other | downstream | 274137 | 1126738 ~ 1126798 (-) | True | G299107 |
TU339629 | other | downstream | 633056 | 765617 ~ 767879 (-) | True | G299173 |
TU339493 | other | downstream | 804306 | 588004 ~ 596629 (-) | True | CI01000086_00587995_00596565 |
TU339299 | other | downstream | 864625 | 535023 ~ 536310 (-) | True | G298872 |
TU340045 | other | upstream | 266925 | 1668206 ~ 1695177 (-) | False | G299528 |
TU340046 | other | upstream | 266925 | 1668206 ~ 1695177 (-) | True | G299528 |
TU340104 | other | upstream | 492633 | 1903205 ~ 1903419 (-) | True | G299570 |
TU340155 | other | upstream | 963050 | 2454446 ~ 2454565 (-) | True | G299608 |
TU340140 | other | upstream | 1464401 | 2865682 ~ 2868103 (-) | False | G299598 |