RNA id: TU339273


Basic Information

Item Value
RNA id TU339273
length 663
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G298850
representative True

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2902048 ~ 2902710 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAATAGAACACAGATAACATAACAAATGTTTAAACTGAGAAATTGTACAATTTTATGCACAAAATGAGCTCATTTCAAATTTGATGCCTGCTACAGGTCTCAAAATAGTTGGGACGGGGGCATGTTTTGAGAGCTTGATAGAGCTTTAGTTGGCATCTGCAGATGGCACGGCGGATTGTGTTTATTGACAGTGGTTTCTGGAAGTATTCCTGGGCCCATTTAGTAATGTCATTGACACAATCATGCCGATGAGTGATGCAGTGTCGTCTGAGGGCCTGAAGATCACGGGCATCCAATAAAGGTCTTCGGCCTTGTCCCTTACGCACAGAGATTTCTCCAGTTTCTCTGAATCTTTTGATGATGTTATGCACTGTAGATGATGAGATTTGCAAAGCCTTTGCAATTTGACGTTGAGGAACATTGTTTTTAAAGTATTCCACAACCTTTTTACGCACTCTTTCACAGCTCTGCCCATCTTTACTTCTGAGAGACTCTGCCTCTCTAAGACATCCCTTTTATAGCTAATCATGTTACAGACCTGATATCAATTAACTTAATTAGTTGCTAGATGTTCTCCCAGCTGAATCTTTTCAAAATTTCTTGCTTTTTCAGCCATTTGTTGCCCCCGTGCCAACTTTTTTGAGACCTGTAGCAGGCATCAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU339191 lncRNA upstream 178495 2703650 ~ 2723553 (+) False G298777
TU339192 lncRNA upstream 178495 2714284 ~ 2723553 (+) True G298777
TU339207 lncRNA upstream 199136 2702637 ~ 2702912 (+) True G298792
TU339156 lncRNA upstream 208541 2612993 ~ 2693507 (+) True G298744
TU339155 lncRNA upstream 259127 2612993 ~ 2642921 (+) False G298744
CI01000086_02881148_02882305.mRNA mRNA upstream 19345 2881021 ~ 2882703 (+) True CI01000086_02881148_02882305
CI01000086_02866143_02871826.mRNA mRNA upstream 30051 2865636 ~ 2871997 (+) True CI01000086_02866143_02871826
CI01000086_02848037_02858638.mRNA mRNA upstream 43216 2847032 ~ 2858832 (+) True CI01000086_02848037_02858638
CI01000086_02807666_02845401.mRNA mRNA upstream 56286 2806368 ~ 2845762 (+) False CI01000086_02807666_02845401
CI01000086_02790491_02793665.mRNA mRNA upstream 107809 2790491 ~ 2794239 (+) True CI01000086_02790491_02793665
TU339241 other upstream 90809 2807583 ~ 2811239 (+) True CI01000086_02807666_02845401
TU338926 other upstream 1020595 1876890 ~ 1881453 (+) True G298529
TU338761 other upstream 1725132 1172156 ~ 1176916 (+) True G298381
TU338747 other upstream 1736126 1162774 ~ 1164582 (+) True G298372
TU338741 other upstream 1754181 1136660 ~ 1147867 (+) False G298366

Expression Profile