RNA id: CI01000092_00964013_00967452.mRNA



Basic Information


Item Value
RNA id CI01000092_00964013_00967452.mRNA
length 683
RNA type mRNA
GC content 0.45
exon number 2
gene id CI01000092_00964013_00967452
representative False

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 963887 ~ 980369 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACATAAAAAAAATGGTTTAGTTGAAATATATTGCACAAAAGTTTTATTACTTAATTAAAAATAAATAATTTTGTTGTTTTTTTGTTGTGACCATTAAAGGGTTAAAGAAGAGGGGAACTAAAGGTCATGGGAGAGGCTGCTCCGACCCAGGCCACCCCAAGTGGTTTTGCACCCATGTTGGGCGTCGGGATGGGAGGATCAATCACACCAATCGCCACTTCAAGAGGATCAGCCGTTCCTCAGCTCCACAGCGCCATAGTGGAGCGCTTGCGTGCCAGAATAGAGCTTTGCCGGCGGCATCACTCCACCTGCCAGGACCGCTATGAGCGTGGTCAGGCAGAAAATTCTGACCGGGAACACGAGAGCACACTGCAGCTCTTAAACATCGTCCATCAGGGCCCCGGGAACAGGAAGACCAAGGGAAGTAGATCTGCCTCCCAGCAACCTCCTGAATACAGCAGAGTGAATGGTGAACATAAAGGCCATAGCTCATCGGAGGCAGAATCCAAAATTTCTTCGCAAATTGCAAGTTATGACCGACTTGGGAACAGAGGGGGATTGTGGAATATCCTCTCATGGAAGAGAAAGTGGGATATTATGATTGCTCCGTTTGCTTATCTAGAGAGATCGCTTTTAATTAACCCAGTTTATATCAATTGAACAATCTTCAATGATATTCTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU344939 lncRNA upstream 53580 909937 ~ 910307 (+) True G303592
TU344934 lncRNA upstream 73840 889786 ~ 890047 (+) True CI01000092_00887219_00908525
TU344968 lncRNA upstream 100572 858236 ~ 863315 (+) False G303621
TU344971 lncRNA upstream 100572 861823 ~ 863315 (+) True G303621
TU344967 lncRNA upstream 106574 857076 ~ 857313 (+) True G303620
TU345012 lncRNA downstream 95679 1063154 ~ 1063471 (+) True G303659
TU345020 lncRNA downstream 103934 1071409 ~ 1071679 (+) True G303667
TU345021 lncRNA downstream 104338 1071813 ~ 1072021 (+) True G303668
TU345025 lncRNA downstream 106754 1074229 ~ 1074522 (+) True G303672
TU345027 lncRNA downstream 108673 1076148 ~ 1076409 (+) True G303674
CI01000092_00887219_00908525.mRNA mRNA upstream 55362 887219 ~ 908525 (+) False CI01000092_00887219_00908525
CI01000092_00869289_00871464.mRNA mRNA upstream 92046 869174 ~ 871841 (+) True CI01000092_00869289_00871464
CI01000092_00868568_00868858.mRNA mRNA upstream 94815 868030 ~ 869072 (+) True CI01000092_00868568_00868858
CI01000092_00779993_00785442.mRNA mRNA upstream 178445 779932 ~ 785442 (+) True CI01000092_00779993_00785442
CI01000092_00759626_00765910.mRNA mRNA upstream 197508 759626 ~ 766379 (+) True CI01000092_00759626_00765910
CI01000092_01034513_01049419.mRNA mRNA downstream 67038 1034513 ~ 1049419 (+) True CI01000092_01034513_01049419
CI01000092_01050305_01051867.mRNA mRNA downstream 82830 1050305 ~ 1052460 (+) True CI01000092_01050305_01051867
CI01000092_01163367_01169844.mRNA mRNA downstream 195833 1163308 ~ 1170769 (+) True CI01000092_01163367_01169844
CI01000092_01625114_01626286.mRNA mRNA downstream 657132 1624607 ~ 1626717 (+) True CI01000092_01625114_01626286
CI01000092_01871020_01880095.mRNA mRNA downstream 903545 1871020 ~ 1882078 (+) True CI01000092_01871020_01880095
TU345140 other downstream 347968 1315443 ~ 1316523 (+) True G303768
TU346472 other downstream 1350317 2317792 ~ 2318234 (+) True G304938
TU347218 other downstream 2699833 3667308 ~ 3667965 (+) True G305584
TU347240 other downstream 2758872 3726347 ~ 3861333 (+) False G305596

Expression Profile