RNA id: CI01000092_02411552_02412283.mRNA


Basic Information

Item Value
RNA id CI01000092_02411552_02412283.mRNA
length 1232
RNA type mRNA
GC content 0.41
exon number 1
gene id CI01000092_02411552_02412283
representative False

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2411552 ~ 2413511 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGCGTTTACCAAATGGAGAACTTGAAGAGGAGGAAGGAATTGGTGTATTTCGAGATAGCCTAACTGAATTTTGGTCTGACTTTTATGACCACTGCACTCTGGGGGTGGATGTGAAAGTGCCCTTCATCAGACATGATTATCAATGTGAGGAGTGGCAAGCAGTAGCTAGAGTGTTTGTTGTAGGAAGGAAGCAAGCTAGGTACTTACCAGTCAAACTGGCAACACCATTCCTGGAAGAAGTACTTTATGGCACTACAACCAGTAGCTTAAAGGATTCCCTGTTGCTGTACATGTATGAACAAGAAAGAGCTGTCGTTATGAGTGCTTTGAAAGACTTTGACTCTGTTGACTCGGATGAACTGTTTGATGTTCTTGATGCACACGAGTGCAAACATGTCCCTACCAAGGACAATCTGGTCCCTCTGCTAGCACAAATGGGACACAAAGCCATCATACAGGTCCCAATGTATGTAATCGAGTGCTGGCGTCCCATTATGGTGGATGTTGCTAGGATGCTACCACTAGATGATTTGCACTGTGCAATTCAACAGAAAAAACCAACTGCAAAAACAGTAAAGGAGCTGTTACACTTCCCAGATGACATGGCCGCACCCCAAACAACAGTTGCACGGTATCTGAAAAGGTACATTGCTGAAATTGTTCTGAACACCCTTCAGCTTTTCCTCCGGTTCTGTACCTTTTCTTCGCAGACCACAAACACACACATGTGAATGCATTTTAAAGCTGCCAATAGGCTATCACAGTTATTCCGATCTCCGCAGTGAATTCAATAAGATCCTCACAAGCTCAGTGTGGGTTATGGATATTATTTAAGCCCACAAAGTTTACAAGCACAATTCTATGAACAAGCATGTGAAGAAATCAAAAAACGTGACATGGTCCCAAGCAGAAATTTGTACACAAAAAAGTAAATTAGCCCAACATTTGGCACAAGGCTACTAGAAGGATAATAGCACTGTTTTCAAGATTGTTGCTGTTTTACAAAATCAGTTCAATAGTTAAGTTGGCAATTGTAGCGCCCCCTAGCGTGTTTAACTATTTTTGTGGGGTGCGCTCCCCGAATTCCTATTTAGAAAATCTCTCTATAATATTAATTAATGCGCTAAATGTAATTCCTTAATTATTACTACCTACTTGTTACCATTTACCTTAGTGGCAGCTTTTAACTTAATGCAAAGTGATCATACAATATCTATATAGCCAAATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU346510 lncRNA upstream 1819 2409296 ~ 2409733 (+) True G304973
TU346509 lncRNA upstream 2732 2408206 ~ 2408820 (+) True G304972
TU346508 lncRNA upstream 3910 2407346 ~ 2407642 (+) True CI01000092_02395791_02407508
TU346506 lncRNA upstream 4439 2406691 ~ 2407113 (+) False CI01000092_02395791_02407508
TU346504 lncRNA upstream 5990 2405226 ~ 2405562 (+) True G304969
TU346517 lncRNA downstream 28194 2440977 ~ 2441268 (+) True G304980
TU346522 lncRNA downstream 35603 2448386 ~ 2448653 (+) True G304984
TU346525 lncRNA downstream 49078 2461861 ~ 2462108 (+) True G304987
TU346641 lncRNA downstream 96259 2509042 ~ 2511516 (+) False G305084
TU346642 lncRNA downstream 96259 2509042 ~ 2517201 (+) False G305084
CI01000092_02395791_02407508.mRNA mRNA upstream 4041 2395601 ~ 2407511 (+) False CI01000092_02395791_02407508
CI01000092_02358901_02363225.mRNA mRNA upstream 47090 2357903 ~ 2364462 (+) True CI01000092_02358901_02363225
CI01000092_02279826_02285934.mRNA mRNA upstream 125473 2276512 ~ 2286079 (+) True CI01000092_02279826_02285934
CI01000092_02186791_02187942.mRNA mRNA upstream 223610 2186791 ~ 2187942 (+) True CI01000092_02186791_02187942
CI01000092_01989763_02003920.mRNA mRNA upstream 407422 1989763 ~ 2004130 (+) True CI01000092_01989763_02003920
CI01000092_02418597_02419541.mRNA mRNA downstream 5625 2418408 ~ 2419996 (+) True CI01000092_02418597_02419541
CI01000092_02470059_02471839.mRNA mRNA downstream 56569 2469352 ~ 2471951 (+) True CI01000092_02470059_02471839
CI01000092_02661524_02662121.mRNA mRNA downstream 248600 2661383 ~ 2662173 (+) False CI01000092_02661524_02662121
CI01000092_02721458_02724152.mRNA mRNA downstream 308610 2721393 ~ 2724152 (+) True CI01000092_02721458_02724152
CI01000092_02739990_02745224.mRNA mRNA downstream 327207 2739990 ~ 2745247 (+) True CI01000092_02739990_02745224
TU346472 other upstream 93318 2317792 ~ 2318234 (+) True G304938
TU345140 other upstream 1095029 1315443 ~ 1316523 (+) True G303768
TU347218 other downstream 1254525 3667308 ~ 3667965 (+) True G305584
TU347240 other downstream 1313564 3726347 ~ 3861333 (+) False G305596

Expression Profile