RNA id: CI01000092_03080030_03082866.mRNA



Basic Information


Item Value
RNA id CI01000092_03080030_03082866.mRNA
length 1379
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000092_03080030_03082866
representative False

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3079562 ~ 3083624 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTATATAGGGAAGCTGTACAGGTGTCTTCAGCCAATGACAGCATGTAATGTCGGTCTTAAGAGAGAAAGCACGTTAATACCAAAGGGTATGGTAAAAATATATTAAACAAAGTAAATACTTTCTTGGGAATCATTAAATTGGGGAATTACATGTGATATTCTCATAAGTACATGCACTCAGTACAAGTACTCACTAAAGTTATAAACTCGCAATTGTCATAACTGTGAGATAAATAATCACTATTACCTTTTTTTATTTGTTTATATCCCGCAATTTTGAAGTTTTTTGCAAACTCAAGATATAAACTCGCAATTCTGAGAATTTTTTTTTGAATTGCGAGTTATAAACTTGCAATTGTAAGTTATACAGTCCGAATTGTGAGATACAAGCTAGTGAGATATAAGCATTGACGTGTGTAAACGGAGACAGGAAGACAGTAAGAATAGCTCTCATGTATTGACTGAAACATGAGGCCTGCTCTCTCTAGAGATGCATCTAAAAAAGACGTCCCTGAGGACTTTGACATTGACATGGACGCTCCTGAAACCGAGAAGGCAGCCGTCGCTATTCAATCGCAGTTCAGGAAGTTCCAGAAGAAGAAAACTGATGAGAAGTCATAGTTGCCAGTGGACTTCTCTGTCCGTACGGCCCCATCAGGACAGCATGGTTTGATGTTGCATGTAATCGAATCCATTCTATATGGACTCAAGGAAGGGGGGATGGGAAATCAAGGTCGTAATCTGTCCATCACTGTTCTAACCTGTTATTTTACTGCTGTAACCGTGAATTCCATAGTTTATATTCATTTTGGTTCCAGCTTTATTCTCCATTCTAGCAAAGAATATCTGTCTTACTACTGATGCATGATTTTCTATTGTAACTCAAAGAGCTGGATTGCCAGCCTGTTCCTTATTTGTGAAAGCACAATATGTTTTTATTGTGAGCTGCTTACGAAATTGATTTTAGTCAGAAACCGTTTGTTAAATACTGAGCATTACATGTACATAAATATAGAGCAGAACTTTATTTTTGTTTCACACCATTAGTCTTCATCTGATGAATGCTTTAGCATACATTCTCATCCCAGCAGAGTTTTAAAAATAGCTCGTCTTTTGAAAGCCATATTGTTGAATAATTCCCAGCTTATTTTCCCGAATCCTCACTGTGTGCTCAGTACTCTTTATTGATTCATTTCTGTGTTGAATTCCATGCTGGATAAAATTGATTTGAGAGCGAGTGTTTGATTGTCTAGTTTGCTGTGGCATATCATAACATTTCTGTTCATTTTCTTCCTTTGCAAAGGATCATGGCACAAACATTAGCCAACCAAACACTCTATCTCACCTCAACTCAGTCTGAATGAAACAAGAAACTATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346881 lncRNA upstream 106754 2972522 ~ 2972808 (+) True G305285
TU346880 lncRNA upstream 107118 2972237 ~ 2972444 (+) True G305284
TU346866 lncRNA upstream 165182 2914079 ~ 2914380 (+) True G305270
TU346861 lncRNA upstream 178594 2900690 ~ 2900968 (+) True G305265
TU346737 lncRNA upstream 196330 2878272 ~ 2883232 (+) True G305148
TU346933 lncRNA downstream 11525 3095149 ~ 3095387 (+) True G305336
TU346965 lncRNA downstream 72045 3155669 ~ 3156083 (+) True G305366
TU346975 lncRNA downstream 100139 3183763 ~ 3183984 (+) True G305376
TU347059 lncRNA downstream 230961 3314585 ~ 3314817 (+) True G305455
TU347060 lncRNA downstream 232061 3315685 ~ 3315984 (+) True G305456
CI01000092_03007267_03029327.mRNA mRNA upstream 50235 3007267 ~ 3029327 (+) True CI01000092_03007267_03029327
CI01000092_02977237_02979350.mRNA mRNA upstream 100184 2977237 ~ 2979378 (+) True CI01000092_02977237_02979350
CI01000092_02958119_02966042.mRNA mRNA upstream 113099 2958024 ~ 2966463 (+) True CI01000092_02958119_02966042
CI01000092_02818349_02838255.mRNA mRNA upstream 241307 2817620 ~ 2838255 (+) True CI01000092_02818349_02838255
CI01000092_02739990_02745224.mRNA mRNA upstream 334315 2739990 ~ 2745247 (+) True CI01000092_02739990_02745224
CI01000092_03329908_03348045.mRNA mRNA downstream 246284 3329908 ~ 3348319 (+) True CI01000092_03329908_03348045
CI01000092_03433283_03442900.mRNA mRNA downstream 349659 3433283 ~ 3442960 (+) True CI01000092_03433283_03442900
CI01000092_03478431_03479274.mRNA mRNA downstream 394807 3478431 ~ 3479793 (+) True CI01000092_03478431_03479274
CI01000092_03532136_03542761.mRNA mRNA downstream 448512 3532136 ~ 3542883 (+) True CI01000092_03532136_03542761
CI01000092_03551674_03573437.mRNA mRNA downstream 468050 3551674 ~ 3573492 (+) True CI01000092_03551674_03573437
TU346472 other upstream 761328 2317792 ~ 2318234 (+) True G304938
TU345140 other upstream 1763039 1315443 ~ 1316523 (+) True G303768
TU347218 other downstream 583684 3667308 ~ 3667965 (+) True G305584
TU347240 other downstream 642723 3726347 ~ 3861333 (+) False G305596

Expression Profile