RNA id: TU345296


Basic Information

Item Value
RNA id TU345296
length 206
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G303899
representative True

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1450042 ~ 1450247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTAAAATGCTAAATTTGGTATTTTCTATTGCTTTTAAGAGTAGGCTACGTATTGACAATCTGTAAACTTATTGGTAGCAGGATTATTTTCAAAAATTTGACATCTCATGTTGCATTTTGACATTTCATTCATGAATTATGAGCTGTTATACACTACCAATCAAAAGTTTAAGGTCAGTAATATTTCTTTAAAGAAATGAATACTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU345289 lncRNA upstream 23254 1426568 ~ 1426788 (+) True G303892
TU345177 lncRNA upstream 65098 1356197 ~ 1384944 (+) True G303798
TU345228 lncRNA upstream 127142 1319009 ~ 1322900 (+) True G303833
TU345219 lncRNA upstream 155499 1294213 ~ 1294543 (+) True G303824
TU345216 lncRNA upstream 160271 1289434 ~ 1289771 (+) True G303821
TU345257 lncRNA downstream 8219 1458466 ~ 1485919 (+) True G303860
TU345328 lncRNA downstream 105427 1555674 ~ 1555874 (+) True G303930
TU345260 lncRNA downstream 107899 1558146 ~ 1562538 (+) True G303863
TU345261 lncRNA downstream 124850 1575097 ~ 1585956 (+) True G303864
TU345351 lncRNA downstream 137039 1587286 ~ 1587761 (+) True G303952
CI01000092_01163367_01169844.mRNA mRNA upstream 279273 1163308 ~ 1170769 (+) True CI01000092_01163367_01169844
CI01000092_01050305_01051867.mRNA mRNA upstream 397582 1050305 ~ 1052460 (+) True CI01000092_01050305_01051867
CI01000092_01034513_01049419.mRNA mRNA upstream 400623 1034513 ~ 1049419 (+) True CI01000092_01034513_01049419
CI01000092_00964013_00967452.mRNA mRNA upstream 482567 963887 ~ 967475 (+) False CI01000092_00964013_00967452
CI01000092_00887219_00908525.mRNA mRNA upstream 541517 887219 ~ 908525 (+) False CI01000092_00887219_00908525
CI01000092_01625114_01626286.mRNA mRNA downstream 174360 1624607 ~ 1626717 (+) True CI01000092_01625114_01626286
CI01000092_01871020_01880095.mRNA mRNA downstream 420773 1871020 ~ 1882078 (+) True CI01000092_01871020_01880095
CI01000092_01889654_01894899.mRNA mRNA downstream 439407 1889654 ~ 1895088 (+) True CI01000092_01889654_01894899
CI01000092_01912280_01944807.mRNA mRNA downstream 462033 1912280 ~ 1945217 (+) True CI01000092_01912280_01944807
CI01000092_01962495_01963651.mRNA mRNA downstream 512248 1962495 ~ 1963887 (+) True CI01000092_01962495_01963651
TU345140 other upstream 133519 1315443 ~ 1316523 (+) True G303768
TU346472 other downstream 867545 2317792 ~ 2318234 (+) True G304938
TU347218 other downstream 2217061 3667308 ~ 3667965 (+) True G305584
TU347240 other downstream 2276100 3726347 ~ 3861333 (+) False G305596

Expression Profile