RNA id: TU347240



Basic Information


Item Value
RNA id TU347240
length 1077
RNA type TUCP
GC content 0.45
exon number 3
gene id G305596
representative False

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3726347 ~ 3863135 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTATTATGTTTATTATTTTCATTTCATTGAACATTGAAAATCAGTTTTTAACAAAAAGCAGCTTAACAAAGGATTTTTGCTAGGCATTTTTTGAATGAACAGGTTTCAGTGTTCTTTTATTCATATCTGTGTTTGCCCATTAGAGAGGATGTGAGTCCTGTAGCGGTGGGAAATGTGTAAATAGTGCATATGAGTGTATTCGTGTATTGTGTGCTTCGAGTAAAGGTTGGTTATGCTGAGAAAAGCCTTCCGGATGACGGGTCGGGGTGTCGGTGCTTGGCGCAGGAGGCAAGGAAGAAGGCAGGGTGGATGGTGTAAAAAATGGCTAGTTTACTCCTTGCTAAGAGACTTTTGGACAGCTGCAAATATTGCCTCAAAGTGAGGCTTCACCTGCTCGCCCAATTCGGTCATCTTTTTCCTCAGTTCTCCAGATCGCACGCTCTCGCGGAACTCCAAGGCTCCCTTTTCCACCTGATCCTTATATTCCTGGATGTAGGGATCCAGCTGGGTCTTCACTTCCTGCGCATACGCAGTCAACTTTTCGCGCACAGCTTCCAGGATGGGCGTCAGCTTGGACTTGGTCTCCTCCCAGTTGGTTCCAATCTTCTCCTTCAAGCTCTTGATCACCGGCTCCAGCTTGGTTTTGACTTCCTCCATGTGCTCACGCTGCTTGACCAAGTACTCGTCGAGGAAAGGCTTCAGCTCGTCTCTGTACTCCTCGAAGTGCTTCTGCAGAACATGCCTGAGCTCCTCACGCATGGGCGCGATCTGCTTGCGGAGGTCCTCGATGTCCTTGGTCAGCTTCTCACGTTGTGGTGCAGAGGCTTCCAGCACATGGGTACCAATTGGGGAGATGGCTTGAAAAGCGTGCTCAAAGTAGCCATGGAGGTTGTCCACGGACTGGCCCAGGAATTCCCTAAACAGAACAAGGATTTAGGTTGTCATTTGTCATTGGAAAAATGGCGTTCTTTACAATGGAAGGTGTCCCCAGCTCATAGCAACATTGGGATAATCAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU347231 lncRNA upstream 43724 3682257 ~ 3682623 (+) True G305591
TU347226 lncRNA upstream 46859 3677883 ~ 3679488 (+) False G305589
TU347227 lncRNA upstream 46859 3678359 ~ 3679488 (+) True G305589
TU347224 lncRNA upstream 48576 3676769 ~ 3677771 (+) True G305588
TU347230 lncRNA upstream 51940 3671980 ~ 3674407 (+) True G305590
TU347314 lncRNA downstream 3959 3865292 ~ 3865638 (+) True G305655
TU347258 lncRNA downstream 21356 3882689 ~ 3906909 (+) True G305605
TU347323 lncRNA downstream 45657 3906990 ~ 3907365 (+) True G305662
TU347324 lncRNA downstream 48430 3909763 ~ 3910933 (+) True G305663
TU347325 lncRNA downstream 55999 3917332 ~ 3917686 (+) True G305664
CI01000092_03693715_03694890.mRNA mRNA upstream 31119 3690550 ~ 3695228 (+) True CI01000092_03693715_03694890
CI01000092_03551674_03573437.mRNA mRNA upstream 152855 3551674 ~ 3573492 (+) True CI01000092_03551674_03573437
CI01000092_03532136_03542761.mRNA mRNA upstream 183464 3532136 ~ 3542883 (+) True CI01000092_03532136_03542761
CI01000092_03478431_03479274.mRNA mRNA upstream 246554 3478431 ~ 3479793 (+) True CI01000092_03478431_03479274
CI01000092_03433283_03442900.mRNA mRNA upstream 283387 3433283 ~ 3442960 (+) True CI01000092_03433283_03442900
CI01000092_04205017_04213986.mRNA mRNA downstream 343684 4205017 ~ 4214128 (+) True CI01000092_04205017_04213986
CI01000092_04218446_04223477.mRNA mRNA downstream 357113 4218446 ~ 4224664 (+) True CI01000092_04218446_04223477
CI01000092_04284298_04291859.mRNA mRNA downstream 422965 4284298 ~ 4291859 (+) True CI01000092_04284298_04291859
CI01000092_04335830_04347365.mRNA mRNA downstream 474497 4335830 ~ 4347554 (+) True CI01000092_04335830_04347365
CI01000092_04355642_04374319.mRNA mRNA downstream 493532 4354865 ~ 4374322 (+) True CI01000092_04355642_04374319
TU347218 other upstream 58382 3667308 ~ 3667965 (+) True G305584
TU346472 other upstream 1408113 2317792 ~ 2318234 (+) True G304938
TU345140 other upstream 2409824 1315443 ~ 1316523 (+) True G303768

Expression Profile