RNA id: CI01000095_01537561_01538239.mRNA



Basic Information


Item Value
RNA id CI01000095_01537561_01538239.mRNA
length 1288
RNA type mRNA
GC content 0.43
exon number 2
gene id CI01000095_01537561_01538239
representative True

Chromosome Information


Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 1537546 ~ 1539065 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACCACAGTGAGCCAAAACATGTTTTTTTTTTTTTTAAAAATGACACAGATACACAAAGAGATCCACATTGATCCCATTAAACAAACAAACAAATGTATGGTCATGTTTTTAATCACAAGATATATCAGTTTATTCTGTGAAACACAACACCTCATGTTTATTATGCAGTAGGCTGTGTCTGTTCATTCAGCAGGCAATGGATCAGGAATAATCAAGCCAGGTCGAACATCTGTCATATTCATTCTAAAAGCTTAATAACATCATTAATGTCAGTCAGACTTTTTGTCTCTCCTGATCATTTACTAGCTTCATCTAAATAAAAGATTGAAACCTTGAGGTTATGAATGATATTGCTATCTATCTATGAGAAAACAGATAGTCTAGGTTGCACTGTACCCCATGTTTACCTATTTGATCGGCAGGGATCCGTCTATAATCTTCCCTTCGACCTATGTAGGTGCAGACAGGACGCACACTGCAGCCTATACGGTAGTCTACTGCACATAGAGGGCGTTTTCCCAGCATGAGAAACATTTCATCGGTACACCCAGCTGGGTAATGCAAACCCACATACTACATCACTGAACACAAATCAGAGAGGGAAGCAAGCTCAAGTAGAGTGCGGAGCATCTAGACCAGAGTGTATAGTGTGAACCTGCCACATGCGTTTGGACTCTTACTGCACAGCCGGTGGATATTTAATCACTATCGGAGATTTTTTCTCCTTTTAAAGTGGCTCTAAATATATCAGCGAACTTGATTAGACTAAAATACCTCCTGTTCTTGATGATACAGCGCTGTTTTTAAACACCGCGGCTGACAGGATATGGCGAGTGTTCAGCCGGTGGCCACGCCGGGAGATAGAACACCTCATCCCGGCCACAGGCATCACGGAGCCGCCGCCGCGGGCTCCGGTACCGGTGACATGATGATGATGATGTCTTGCTCCGGCTCGGTGGTGCTACCGGCCGGGGTGATAAACCCCTCGGTTCCCATCCGGAATATCAAGACGAAATTCGCAGTGCTCACCGGTCTCATTCAAGTCGGCGAGGTCAGCAATAGAGACATAGTGGAAACAGTGTTGAATCTGTCACTGACATATGGCAAAGTGTCTGTCATACTTATTAACAGTAACCAAACAGGTGTCCTACATGCAACCTGTGGTACTATCCTACACAGGAAAAATGACTCTTGTTCTTCATTAAAAACATCCTTAAAACTAGGTATAATCTCTCTTTTGTTAGACTTTTTGTTAAAAACTATTTGGCAATGAGGGAAGAAAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU352172 lncRNA downstream 245539 1261954 ~ 1292007 (-) True G309805
TU351950 lncRNA downstream 402091 1096224 ~ 1135455 (-) True G309622
TU352069 lncRNA downstream 407096 1104785 ~ 1130450 (-) True G309719
TU352060 lncRNA downstream 469223 1067935 ~ 1068323 (-) True G309710
TU352034 lncRNA downstream 472799 1064180 ~ 1064747 (-) True G309684
TU352176 lncRNA upstream 75403 1614468 ~ 1616033 (-) True G309809
TU352300 lncRNA upstream 199953 1739018 ~ 1739223 (-) True G309928
TU352317 lncRNA upstream 286582 1825647 ~ 1825921 (-) True G309935
TU352341 lncRNA upstream 315000 1854065 ~ 1854369 (-) True G309947
TU352342 lncRNA upstream 315588 1854653 ~ 1855158 (-) True G309948
CI01000095_01200809_01460128.mRNA mRNA downstream 77418 1200809 ~ 1460128 (-) True CI01000095_01200809_01460128
CI01000095_00914578_00997684.mRNA mRNA downstream 539862 914578 ~ 997684 (-) True CI01000095_00914578_00997684
CI01000095_00790125_00813901.mRNA mRNA downstream 723330 789462 ~ 814216 (-) True CI01000095_00790125_00813901
CI01000095_00219520_00237347.mRNA mRNA downstream 1300114 219436 ~ 237432 (-) True CI01000095_00219520_00237347
CI01000095_00183587_00185442.mRNA mRNA downstream 1350641 183219 ~ 186905 (-) True CI01000095_00183587_00185442
CI01000095_01543090_01636658.mRNA mRNA upstream 4025 1543090 ~ 1636658 (-) True CI01000095_01543090_01636658
CI01000095_01639699_01643103.mRNA mRNA upstream 100520 1639585 ~ 1643326 (-) True CI01000095_01639699_01643103
CI01000095_01675024_01682552.mRNA mRNA upstream 134896 1673961 ~ 1682780 (-) True CI01000095_01675024_01682552
CI01000095_01699194_01700598.mRNA mRNA upstream 160004 1699069 ~ 1700816 (-) True CI01000095_01699194_01700598
CI01000095_01747706_01752312.mRNA mRNA upstream 208641 1747706 ~ 1752312 (-) True CI01000095_01747706_01752312
TU352106 other downstream 355788 1178597 ~ 1181758 (-) True G309753
TU351957 other downstream 449380 1085588 ~ 1088166 (-) True G309626
TU352182 other upstream 1124265 2663330 ~ 2731704 (-) True G309815
TU352668 other upstream 1653033 3192098 ~ 3222668 (-) False G310207
TU353276 other upstream 1991847 3530912 ~ 3537233 (-) True CI01000095_03528759_03538412
TU353582 other upstream 2820596 4359661 ~ 4362626 (-) True G311036
TU354345 other upstream 3609960 5149025 ~ 5154494 (-) True G311701

Expression Profile