RNA id: TU351513


Basic Information

Item Value
RNA id TU351513
length 237
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G309253
representative True

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 76763 ~ 77189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGGCGCCCTCCTCAAAGAGCGCCCAGCGGGAGCAGAGAGGTTTTATATTAAACTTATCACAATGCTCGCAAACAACCCCCTAATTGACAGACAACACCAAATAAGACACACGATAACACAGAGCGCTTGCTGAAGACACAGAAGCTGGTGTTCTTTGTTCTCAGAAGTGCTTTATAGTTTCCTGGTCCGTGACGTCACCCGCTCTGACGTCCCATCACCCTATTGGTTCGATTTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU350039 lncRNA downstream 18188 58366 ~ 58575 (-) True G308032
TU350024 lncRNA downstream 31548 44933 ~ 45215 (-) True G308017
TU350011 lncRNA downstream 44061 32424 ~ 32702 (-) True G308004
TU350007 lncRNA downstream 45654 30845 ~ 31109 (-) True G308000
TU350003 lncRNA downstream 48064 28364 ~ 28699 (-) True G307996
TU351535 lncRNA upstream 14453 91642 ~ 98251 (-) True G309272
TU351531 lncRNA upstream 14764 91953 ~ 98477 (-) False G309270
TU351532 lncRNA upstream 14764 91953 ~ 98477 (-) True G309270
TU351534 lncRNA upstream 15174 92363 ~ 99105 (-) True G309271
TU351559 lncRNA upstream 76403 153592 ~ 153846 (-) True G309293
CI01000095_00166019_00170944.mRNA mRNA upstream 88830 166019 ~ 170944 (-) True CI01000095_00166019_00170944
CI01000095_00170941_00172566.mRNA mRNA upstream 93752 170941 ~ 172566 (-) True CI01000095_00170941_00172566
CI01000095_00173095_00181309.mRNA mRNA upstream 95906 173095 ~ 181309 (-) True CI01000095_00173095_00181309
CI01000095_00183587_00185442.mRNA mRNA upstream 106030 183219 ~ 186905 (-) True CI01000095_00183587_00185442
CI01000095_00219520_00237347.mRNA mRNA upstream 142247 219436 ~ 237432 (-) True CI01000095_00219520_00237347
TU351957 other upstream 1008399 1085588 ~ 1088166 (-) True G309626
TU352106 other upstream 1101408 1178597 ~ 1181758 (-) True G309753
TU352182 other upstream 2586141 2663330 ~ 2731704 (-) True G309815
TU352668 other upstream 3114909 3192098 ~ 3222668 (-) False G310207
TU353276 other upstream 3453723 3530912 ~ 3537233 (-) True CI01000095_03528759_03538412

Expression Profile