RNA id: TU352300


Basic Information

Item Value
RNA id TU352300
length 206
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G309928
representative True

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 1739018 ~ 1739223 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAGACTGCAGATTCTTACACTGTTTGGAGAAGACTAGGTCCATTCATTTATTATGACTGATTTAGCAACAATACCTGTAGTTATATAATTATATTAATTACAATTTTGGCAACTTTATGATATGGATCCTTTCCCAGAACCCAAACCAATGAATGTCAGATCAAGGAAGATTATATGATTTCAATATGGCTCAGCCCCTTAATGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU352176 lncRNA downstream 122985 1614468 ~ 1616033 (-) True G309809
TU352172 lncRNA downstream 447011 1261954 ~ 1292007 (-) True G309805
TU351950 lncRNA downstream 603563 1096224 ~ 1135455 (-) True G309622
TU352069 lncRNA downstream 608568 1104785 ~ 1130450 (-) True G309719
TU352060 lncRNA downstream 670695 1067935 ~ 1068323 (-) True G309710
TU352317 lncRNA upstream 86424 1825647 ~ 1825921 (-) True G309935
TU352341 lncRNA upstream 114842 1854065 ~ 1854369 (-) True G309947
TU352342 lncRNA upstream 115430 1854653 ~ 1855158 (-) True G309948
TU352316 lncRNA upstream 122513 1861736 ~ 1893780 (-) True G309934
TU352148 lncRNA upstream 139836 1879059 ~ 1915282 (-) True G309781
CI01000095_01699194_01700598.mRNA mRNA downstream 38202 1699069 ~ 1700816 (-) True CI01000095_01699194_01700598
CI01000095_01675024_01682552.mRNA mRNA downstream 56238 1673961 ~ 1682780 (-) True CI01000095_01675024_01682552
CI01000095_01639699_01643103.mRNA mRNA downstream 95692 1639585 ~ 1643326 (-) True CI01000095_01639699_01643103
CI01000095_01543090_01636658.mRNA mRNA downstream 102360 1543090 ~ 1636658 (-) True CI01000095_01543090_01636658
CI01000095_01537561_01538239.mRNA mRNA downstream 199953 1537546 ~ 1539065 (-) True CI01000095_01537561_01538239
CI01000095_01747706_01752312.mRNA mRNA upstream 8483 1747706 ~ 1752312 (-) True CI01000095_01747706_01752312
CI01000095_01753866_01754199.mRNA mRNA upstream 14622 1753845 ~ 1754199 (-) True CI01000095_01753866_01754199
CI01000095_01762546_01807415.mRNA mRNA upstream 22809 1762032 ~ 1807474 (-) True CI01000095_01762546_01807415
CI01000095_01814503_01819719.mRNA mRNA upstream 74832 1814055 ~ 1819719 (-) True CI01000095_01814503_01819719
CI01000095_01821436_01824400.mRNA mRNA upstream 81987 1821210 ~ 1824414 (-) True CI01000095_01821436_01824400
TU352106 other downstream 557260 1178597 ~ 1181758 (-) True G309753
TU351957 other downstream 650852 1085588 ~ 1088166 (-) True G309626
TU352182 other upstream 924107 2663330 ~ 2731704 (-) True G309815
TU352668 other upstream 1452875 3192098 ~ 3222668 (-) False G310207
TU353276 other upstream 1791689 3530912 ~ 3537233 (-) True CI01000095_03528759_03538412
TU353582 other upstream 2620438 4359661 ~ 4362626 (-) True G311036
TU354345 other upstream 3409802 5149025 ~ 5154494 (-) True G311701

Expression Profile