RNA id: CI01000110_01422600_01428949.mRNA



Basic Information


Item Value
RNA id CI01000110_01422600_01428949.mRNA
length 1553
RNA type mRNA
GC content 0.44
exon number 6
gene id CI01000110_01422600_01428949
representative False

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 1421628 ~ 1428949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTGGCGTGCTGGAGCTGAAATGCGTTGATGACACACGGCACCCAGTAGATGTCGCTGTTTACACGTTCTCCATCATGACTCAGCCAGTACGCTCGTTCGGCGGCGGCGGTAGTAGGGTACTGTGGGCTTGGTTCTGTCGCTGTGGACGGGCCGGAGATGGCGGAGTACAGCCAGACGGGTATATTAACGGCCCTGCTGCTGTTTACTGTGGTAACACTGAGGGATATTTATGTGGGCCGCAACAGCATGACTCAACAAGACAGCGCCGGACCCGACATGCTCACACAGAGACCGAACAAACACACATTCTACACGGGTCCGGTTCTCAAGTTCCAGTTCTGGAGTACTCCCGGTCCATCAGCCAGCTGTACCCAGACATCCGAATTGAGGGAGAGAATTACCCTCCCAAACCCATCAACAAATATCTAGGCAACTTCATCTCCTATTTCAAACTCCTTGCCATTGCTTTGATTGTGACTGGACAAAATCCTTTCCAAATGTTTGGAATGAACACTCCAAGAATATGGTTCTGGGGACAGGAGAATAAGATTTTCTCCTGCCTTATGGCATTCTTCCTTAGTAACATGTTGGAGACCCATTTCCTCTCGACAGGAGCTTTTGAGATTACATTGAATGGTCTCCGGAGCTGTTTCTCTAGTCAGCGGGACTGTAGACTGTGGCATAATGAAGGCCTGCGCTGCAAACAGCACACTGTGAGCGCAGACTGGATGCTCGGCCACCACACACACTCCTTCTGCCCGGCGACACACACCTTTGGATCGACTACATCTCTTCAGAGCATCAAGCTTCATGCATTTGTAGTAGGAGAGTCACATGAGAGCTAAAGGCACTACATTTATTACTGAATGCTGAAGTTAGGGTTTTTTTTTGTTTTTGTTTTGTTTTTTTGGCCAGGGTAGTTCTGTTTGTAATTGAAATCGAATGGAATGTTCCATCTTTCTCAAGGGCAACTGTGATGTTTTCTTAATGTAAATGTCTTTAAATGACCTTTAACATGATCATGTGTTTGCACTGGTTTAGACTGTACTGTACTCGGGGTAGGCCTATCTGACTTTTTTTTAATTAGTGAGAATGTTTGTGTACTGCAGAATCATGCAGTTTTGTTAGAGTGAGCTTAAATGAGTTTAACTGAGTTTAAATGCTTGAAGTGGTACATTTTTGTTGTGTTTGTCACAGGTTCGCTGGTTAGATTCATAAGCACTGCTTGTGTTTATTGAGGGAATTATTAAGGCCAGATCTTCTTCTGCTTAGACTTGCCAGAGCACTGCCAGAGTAATCTGTGGAATTGTTTTAATGATGGTGTGATTGAGAGTGTTGCATATCAGAAGATGTGAATGGGAATTCCAAAGACAGCCTGTATTTTTCCAGCTCTCTCCATATAGACATGGCGGCAAGCAATGTACCCCTTATATTTTAGCGTACCTCTCTGTGAATTTGTAACAACAGTGATACCGATAGTTGGGATTAAGTTGCATTGAGAAAATATATTTTACTTTGTTTCACAGTGATGTAAAATCAAGATTCCAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU367653 lncRNA downstream 2247 1419346 ~ 1419646 (-) True G323342
TU367583 lncRNA downstream 74580 1282046 ~ 1347313 (-) True G323274
TU367449 lncRNA downstream 171813 1243849 ~ 1250080 (-) False G323149
TU367450 lncRNA downstream 171813 1243849 ~ 1250080 (-) False G323149
TU367454 lncRNA downstream 171813 1243849 ~ 1250080 (-) True G323149
TU367657 lncRNA upstream 27463 1456412 ~ 1456691 (-) True G323346
TU367702 lncRNA upstream 90810 1519759 ~ 1520020 (-) True G323388
TU367709 lncRNA upstream 106635 1535584 ~ 1536004 (-) True G323395
TU367882 lncRNA upstream 325600 1754549 ~ 1754759 (-) True G323559
TU367904 lncRNA upstream 352050 1780999 ~ 1781243 (-) True G323581
CI01000110_01135230_01139236.mRNA mRNA downstream 282657 1135131 ~ 1139236 (-) True CI01000110_01135230_01139236
CI01000110_01126191_01127662.mRNA mRNA downstream 294231 1125835 ~ 1127662 (-) True CI01000110_01126191_01127662
CI01000110_01112020_01115441.mRNA mRNA downstream 306311 1111926 ~ 1115582 (-) True CI01000110_01112020_01115441
CI01000110_00929399_00931607.mRNA mRNA downstream 490168 929146 ~ 931725 (-) True CI01000110_00929399_00931607
CI01000110_00779093_00781105.mRNA mRNA downstream 640237 778574 ~ 781656 (-) True CI01000110_00779093_00781105
CI01000110_01432049_01434499.mRNA mRNA upstream 2756 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01436253_01450759.mRNA mRNA upstream 7256 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01864492_01865547.mRNA mRNA upstream 435529 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01988105_01990600.mRNA mRNA upstream 557640 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_02794268_02794597.mRNA mRNA upstream 1365233 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
TU367430 other downstream 185044 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 207503 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 1316074 103265 ~ 105819 (-) True G322580
TU369365 other upstream 1686509 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 1686509 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 1687202 3116151 ~ 3120099 (-) True G324936

Expression Profile