RNA id: CI01000110_01864492_01865547.mRNA


Basic Information

Item Value
RNA id CI01000110_01864492_01865547.mRNA
length 575
RNA type mRNA
GC content 0.44
exon number 2
gene id CI01000110_01864492_01865547
representative True

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 1864478 ~ 1865547 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCTGCCGCTGGACGCGAATACAGTGTTGCAAGTTTGATGTGTCTCAGAGCAGGTATTAACCGTCACATTACAAAGTACAACATCATAAGTGATAAAGACTTCAAGTCAAGCAATGCCGTCTTTAAATCAGTTTTAAAGCGCTACAGGAAAAATGGAAAAGACACCAGCGTTCATCATCAGCGTATTACTGAGTCTGACTTGGAGAAAATTAGAAATGCACCTGCACTCTCCCCTTTCACACCCACAGGACTTGTGGAAGGTATCTCACAAATGTACACAAACCATAGTTTGCAGAGCACTGCCGTTGGACGACTCTCTGATGCAGGACTAGAAAGTCGCCAGATCATGTCAGTGACAGGCCACCGATGCGAGGCGAGTTTGCGGTCATATTGGGCCCCATCTTTGTCAGAGAGGAGGGCATGGAGTGACATACTGACATCTAGAACCTCAACAAGCAAAGCGAAACATAATTTCACCGCCAAGCCTAAACCTGAAATAACCCTACCCTTTTCCATGTCTAATTTCACGATAAATGGAAATGTTGAGTTTAACATCAATTAGTAGGCTATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU368093 lncRNA downstream 11176 1853091 ~ 1853302 (-) True G323748
TU368066 lncRNA downstream 38966 1825295 ~ 1825512 (-) True G323722
TU367904 lncRNA downstream 83235 1780999 ~ 1781243 (-) True G323581
TU367882 lncRNA downstream 109719 1754549 ~ 1754759 (-) True G323559
TU367709 lncRNA downstream 328474 1535584 ~ 1536004 (-) True G323395
TU368176 lncRNA upstream 227964 2093511 ~ 2093718 (-) True G323827
TU368329 lncRNA upstream 276058 2141605 ~ 2142071 (-) True G323962
TU368332 lncRNA upstream 286079 2151626 ~ 2151847 (-) True G323965
TU368336 lncRNA upstream 305215 2170762 ~ 2170983 (-) True G323969
TU368342 lncRNA upstream 319108 2184655 ~ 2184892 (-) True G323975
CI01000110_01436253_01450759.mRNA mRNA downstream 413719 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01432049_01434499.mRNA mRNA downstream 429979 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01422600_01428949.mRNA mRNA downstream 435529 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_01135230_01139236.mRNA mRNA downstream 725242 1135131 ~ 1139236 (-) True CI01000110_01135230_01139236
CI01000110_01126191_01127662.mRNA mRNA downstream 736816 1125835 ~ 1127662 (-) True CI01000110_01126191_01127662
CI01000110_01988105_01990600.mRNA mRNA upstream 121042 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_02794268_02794597.mRNA mRNA upstream 928635 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
CI01000110_02890041_02906679.mRNA mRNA upstream 1024413 2889960 ~ 2908219 (-) False CI01000110_02890041_02906679
CI01000110_03015589_03024689.mRNA mRNA upstream 1149703 3015250 ~ 3025361 (-) True CI01000110_03015589_03024689
CI01000110_03084686_03087106.mRNA mRNA upstream 1218892 3084439 ~ 3087106 (-) True CI01000110_03084686_03087106
TU367430 other downstream 627629 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 650088 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 1758659 103265 ~ 105819 (-) True G322580
TU369365 other upstream 1249911 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 1249911 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 1250604 3116151 ~ 3120099 (-) True G324936

Expression Profile