RNA id: CI01000110_03557901_03558151.mRNA


Basic Information

Item Value
RNA id CI01000110_03557901_03558151.mRNA
length 307
RNA type mRNA
GC content 0.48
exon number 1
gene id CI01000110_03557901_03558151
representative True

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3557845 ~ 3558151 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGAGTTACATTCAGCCTCCATGCTGAAGGCGCATGAGGAGGGTATCAGCACAGCCAAGCCTGCATCCGATGCGTTTTTCATGTGGACATGGGTGGAAATTAGGCCTCCGCTTGCTGTCTGCGCTGCTTTATCTGCATTTTCCCACCAGGTCATTACAGCCCGACAGGAATATAATGGAACTAAGTCATTTTCTCTATCAGAGGATAGTGAGAAGATCATGTGTCAGCGAGCTCTACCAGCACTAGCCTGATGATGAGGATGATGGGAAGCTATCTGCTAACTCGAGGATGCTTTACTGCAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU369565 lncRNA downstream 123877 3399750 ~ 3433968 (-) True G325120
TU369558 lncRNA downstream 175953 3381611 ~ 3381892 (-) True G325113
TU369552 lncRNA downstream 197655 3359976 ~ 3360190 (-) True G325107
TU369535 lncRNA downstream 212740 3344857 ~ 3345105 (-) True G325094
TU369520 lncRNA downstream 242656 3314950 ~ 3315189 (-) True G325079
TU369594 lncRNA upstream 52013 3610164 ~ 3610398 (-) True G325149
TU369659 lncRNA upstream 164279 3722430 ~ 3722643 (-) True G325206
TU369614 lncRNA upstream 206211 3764362 ~ 3765023 (-) True G325162
TU369668 lncRNA upstream 227145 3785296 ~ 3789585 (-) True G325215
TU369669 lncRNA upstream 234654 3792805 ~ 3793040 (-) True G325216
CI01000110_03543809_03557376.mRNA mRNA downstream 352 3543690 ~ 3557493 (-) True CI01000110_03543809_03557376
CI01000110_03523710_03531446.mRNA mRNA downstream 26399 3523340 ~ 3531446 (-) True CI01000110_03523710_03531446
CI01000110_03488751_03505468.mRNA mRNA downstream 52377 3487397 ~ 3505468 (-) True CI01000110_03488751_03505468
CI01000110_03453577_03480559.mRNA mRNA downstream 77286 3452867 ~ 3480559 (-) True CI01000110_03453577_03480559
CI01000110_03438821_03442595.mRNA mRNA downstream 115184 3438773 ~ 3442661 (-) True CI01000110_03438821_03442595
CI01000110_03560549_03575577.mRNA mRNA upstream 1696 3559847 ~ 3575577 (-) True CI01000110_03560549_03575577
CI01000110_03583086_03590983.mRNA mRNA upstream 24863 3583014 ~ 3590983 (-) True CI01000110_03583086_03590983
CI01000110_03605251_03608582.mRNA mRNA upstream 46783 3604934 ~ 3608706 (-) True CI01000110_03605251_03608582
CI01000110_03611195_03618116.mRNA mRNA upstream 52789 3610940 ~ 3618153 (-) True CI01000110_03611195_03618116
CI01000110_03633137_03638227.mRNA mRNA upstream 74942 3633093 ~ 3638227 (-) True CI01000110_03633137_03638227
TU369365 other downstream 437746 3115458 ~ 3120099 (-) False G324936
TU369369 other downstream 437746 3115458 ~ 3120099 (-) False G324936
TU369366 other downstream 437746 3116151 ~ 3120099 (-) True G324936
TU367430 other downstream 2320996 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 2343455 1205829 ~ 1214390 (-) False G323133

Expression Profile