RNA id: TU366969



Basic Information


Item Value
RNA id TU366969
length 233
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G322758
representative True

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 677438 ~ 677670 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GAATCCATTCAGCCGATCTCCGGGTCTGGCGGTACCACTTTTAGCATAGCTTAGCATAGTTCATTGAATCTGATTAGACCGTTAGCATCTCGCTCAAAAATGACCAAAGAGTTTCGATATTTTTCCTATTTAAAACTTGACTCTTCTGTAGTTACATTGTGTACTAAGACCGACGGAAAATGAAAAGTTGCGATTTTCTAGGCCGATATAGCTAGGAACTATACTCTCATTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU366967 lncRNA downstream 6885 670331 ~ 670553 (-) True G322756
TU366925 lncRNA downstream 18667 657953 ~ 658771 (-) True G322714
TU366927 lncRNA downstream 21387 655790 ~ 656051 (-) True G322716
TU366941 lncRNA downstream 30915 619975 ~ 646523 (-) True G322730
TU366829 lncRNA downstream 515109 162120 ~ 162329 (-) True G322625
TU366994 lncRNA upstream 24562 702232 ~ 702469 (-) True G322779
TU367001 lncRNA upstream 37288 714958 ~ 715157 (-) True G322786
TU367002 lncRNA upstream 39921 717591 ~ 717822 (-) True G322787
TU366972 lncRNA upstream 89323 766993 ~ 770326 (-) True G322761
TU367330 lncRNA upstream 307406 985076 ~ 1134588 (-) False G323048
CI01000110_00485210_00497592.mRNA mRNA downstream 179583 485210 ~ 497855 (-) True CI01000110_00485210_00497592
CI01000110_00479846_00482461.mRNA mRNA downstream 193441 479710 ~ 483997 (-) True CI01000110_00479846_00482461
CI01000110_00407073_00438547.mRNA mRNA downstream 238438 406504 ~ 439000 (-) True CI01000110_00407073_00438547
CI01000110_00326156_00333256.mRNA mRNA downstream 342777 325855 ~ 334661 (-) True CI01000110_00326156_00333256
CI01000110_00319793_00324629.mRNA mRNA downstream 352809 319692 ~ 324629 (-) True CI01000110_00319793_00324629
CI01000110_00749362_00764862.mRNA mRNA upstream 71233 748903 ~ 764948 (-) True CI01000110_00749362_00764862
CI01000110_00779093_00781105.mRNA mRNA upstream 100904 778574 ~ 781656 (-) True CI01000110_00779093_00781105
CI01000110_00929399_00931607.mRNA mRNA upstream 251476 929146 ~ 931725 (-) True CI01000110_00929399_00931607
CI01000110_01112020_01115441.mRNA mRNA upstream 434256 1111926 ~ 1115582 (-) True CI01000110_01112020_01115441
CI01000110_01126191_01127662.mRNA mRNA upstream 448165 1125835 ~ 1127662 (-) True CI01000110_01126191_01127662
TU366784 other downstream 571619 103265 ~ 105819 (-) True G322580
TU367428 other upstream 528159 1205829 ~ 1214390 (-) False G323133
TU367430 other upstream 528159 1205829 ~ 1236849 (-) True G323133
TU369365 other upstream 2437788 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 2437788 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 2438481 3116151 ~ 3120099 (-) True G324936

Expression Profile