RNA id: TU367428


Basic Information

Item Value
RNA id TU367428
length 1122
RNA type TUCP
GC content 0.50
exon number 4
gene id G323133
representative False

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 1205829 ~ 1236849 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGGGTGTAACGTCTACCAACACATTTGAAGGTCTTTCACCAAGTAGGACATGGAACAACATTTCTAACAACCATCTAGTATTGTAGGGTTAGCCTTAGGGGCCAGGATTGAGGCTTCAACAACATTCATATCAACCTGCTATTTTCCACTGAACACAAATGTTGTTGCAGGACCAACAAAAGATGATCCAGGAACACATCCTACTTGGCAAAATGATGGTCACCCACGAGCAAACACAGCCTGCCAAAGTATTTTCGGCGTAAATCGGACTCAGGACTGGACGGATGCGTGCGGTACCTCATAGTGTACAGGATGGTGCCGTTCTTCATGATTCGGAAGAGTCTATTGGGCGCCGTCATGTTGTGAGCCACAGATCTTTTGCCATTCCGGAAGAACGTGTCAGGGGTCCAGACTTTGGTCACCATCAGGTTATTTAGCCGGAGGATCTCCACTGGGCCATCATATTTCAACCGCCTATCCACCCACGTCTGGCGGAAGAACACATCCATGGTGTACTCCATCTCCACGTCGGAAACTGGGCCAAAACTTGTGACGTAAATATCAGTCTTCACTTCTGTTACTGGACCCCCAAATCCAGGTCGGAGTCTGTTGTCGTATCCATCCAGGAGTCGGTCCAGAATGCGCGTGAAATTTTCCGGGTATAATTTCTCATCCTTTCTGATCTGTCCAGATATTCTCTTTATGCAAGCCGCCACACAGAGAAAGTAGAGGAGAGTGGAAATAGAAGTGGGGTACATCGCAGTCACCATCTCCTTCTTGGCAGAAACCATGTTTACATGCCATTCTTTAAGCCTTCTTCACATTTCCCTTCGCCAAACGTCCCGAGGAAAGATCGAGGAAACGTGCGGCAGCGCGCAAGACGCGCTTCACCATCACCCGCAAAGCAGTGCCAGCGAAGCATCCAAATCCAGAACTCGCTCTGCGCCCGATGGATCGCCTACATTCCAACCCCAAACTCAGTGGTTAAGAGAAGCATATGGTGAGGCATCCTGTGGAATCGTGCGTCTCGCTGTGAGGAGGTTAGAGGAGAGAGAGGAGGACGCGCTGGGTTCCTACACACTCGCATCAGTGCCAAAACTGGGACGTGCGTCCGACGCGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU367420 lncRNA downstream 30312 1175311 ~ 1175517 (-) True G323125
TU367419 lncRNA downstream 30748 1174860 ~ 1175081 (-) True G323124
TU367405 lncRNA downstream 55675 1149867 ~ 1150154 (-) True G323110
TU367402 lncRNA downstream 59451 1146115 ~ 1146378 (-) True G323107
TU367330 lncRNA downstream 71241 985076 ~ 1134588 (-) False G323048
TU367449 lncRNA upstream 29459 1243849 ~ 1250080 (-) False G323149
TU367450 lncRNA upstream 29459 1243849 ~ 1250080 (-) False G323149
TU367454 lncRNA upstream 29459 1243849 ~ 1250080 (-) True G323149
TU367583 lncRNA upstream 67656 1282046 ~ 1347313 (-) True G323274
TU367631 lncRNA upstream 151269 1365659 ~ 1443509 (-) True G323322
CI01000110_01135230_01139236.mRNA mRNA downstream 66593 1135131 ~ 1139236 (-) True CI01000110_01135230_01139236
CI01000110_01126191_01127662.mRNA mRNA downstream 78167 1125835 ~ 1127662 (-) True CI01000110_01126191_01127662
CI01000110_01112020_01115441.mRNA mRNA downstream 90247 1111926 ~ 1115582 (-) True CI01000110_01112020_01115441
CI01000110_00929399_00931607.mRNA mRNA downstream 274104 929146 ~ 931725 (-) True CI01000110_00929399_00931607
CI01000110_00779093_00781105.mRNA mRNA downstream 424173 778574 ~ 781656 (-) True CI01000110_00779093_00781105
CI01000110_01422600_01428949.mRNA mRNA upstream 207503 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_01432049_01434499.mRNA mRNA upstream 217315 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01436253_01450759.mRNA mRNA upstream 221815 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01864492_01865547.mRNA mRNA upstream 650088 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01988105_01990600.mRNA mRNA upstream 772199 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
TU366784 other downstream 1100010 103265 ~ 105819 (-) True G322580
TU369365 other upstream 1901068 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 1901068 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 1901761 3116151 ~ 3120099 (-) True G324936

Expression Profile