RNA id: TU367653


Basic Information

Item Value
RNA id TU367653
length 262
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G323342
representative True

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 1419346 ~ 1419646 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTAACCTTAACTTGTGCAGCGATTGGTGGAAACGTCTCTCTCAGTGCATAACTTACATTTCACAGACATTTTCTCCATCTGTAAATGTTAGAAAGTCGAGAAAATATTTCCATTTTGCTGTCCAGGAGACAGGAGTGGAAGCACAAACTTCCGTGAACGAGCGCCGCCGTGCGCATGCGCGCCAAACAGACGGAGCGCAATAATTCTGACTAAAATATACATTTAGCTAAAATATTTGTTGTTGATTATTTGTTTTTGTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU367583 lncRNA downstream 72033 1282046 ~ 1347313 (-) True G323274
TU367449 lncRNA downstream 169266 1243849 ~ 1250080 (-) False G323149
TU367450 lncRNA downstream 169266 1243849 ~ 1250080 (-) False G323149
TU367454 lncRNA downstream 169266 1243849 ~ 1250080 (-) True G323149
TU367420 lncRNA downstream 243829 1175311 ~ 1175517 (-) True G323125
TU367627 lncRNA upstream 1982 1424682 ~ 1424828 (-) True G323318
TU367657 lncRNA upstream 36766 1456412 ~ 1456691 (-) True G323346
TU367702 lncRNA upstream 100113 1519759 ~ 1520020 (-) True G323388
TU367709 lncRNA upstream 115938 1535584 ~ 1536004 (-) True G323395
TU367882 lncRNA upstream 334903 1754549 ~ 1754759 (-) True G323559
CI01000110_01135230_01139236.mRNA mRNA downstream 280110 1135131 ~ 1139236 (-) True CI01000110_01135230_01139236
CI01000110_01126191_01127662.mRNA mRNA downstream 291684 1125835 ~ 1127662 (-) True CI01000110_01126191_01127662
CI01000110_01112020_01115441.mRNA mRNA downstream 303764 1111926 ~ 1115582 (-) True CI01000110_01112020_01115441
CI01000110_00929399_00931607.mRNA mRNA downstream 487621 929146 ~ 931725 (-) True CI01000110_00929399_00931607
CI01000110_00779093_00781105.mRNA mRNA downstream 637690 778574 ~ 781656 (-) True CI01000110_00779093_00781105
CI01000110_01422600_01428949.mRNA mRNA upstream 2247 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_01432049_01434499.mRNA mRNA upstream 12059 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01436253_01450759.mRNA mRNA upstream 16559 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01864492_01865547.mRNA mRNA upstream 444832 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01988105_01990600.mRNA mRNA upstream 566943 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
TU367430 other downstream 182497 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 204956 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 1313527 103265 ~ 105819 (-) True G322580
TU369365 other upstream 1695812 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 1695812 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 1696505 3116151 ~ 3120099 (-) True G324936

Expression Profile