RNA id: TU368176



Basic Information


Item Value
RNA id TU368176
length 208
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G323827
representative True

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2093511 ~ 2093718 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GAAATATTATATTGATAATCTGTTCACAACAATTAGGAATAATTAAACTACAGGCGGTCATGTTGATTTCTATCATAAATGTTTAAACAAATATGACTTGTAACTTTACAATCCAAAAGGTTAAGCAGCTTTTTGGCAGCCCATATTTAATGCAAATTCAGTGCCAGTGTTAATTTTACCAATACATAAGATGGTAAGGCAAGCGGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU368093 lncRNA downstream 240209 1853091 ~ 1853302 (-) True G323748
TU368066 lncRNA downstream 267999 1825295 ~ 1825512 (-) True G323722
TU367904 lncRNA downstream 312268 1780999 ~ 1781243 (-) True G323581
TU367882 lncRNA downstream 338752 1754549 ~ 1754759 (-) True G323559
TU367709 lncRNA downstream 557507 1535584 ~ 1536004 (-) True G323395
TU368329 lncRNA upstream 47887 2141605 ~ 2142071 (-) True G323962
TU368332 lncRNA upstream 57908 2151626 ~ 2151847 (-) True G323965
TU368336 lncRNA upstream 77044 2170762 ~ 2170983 (-) True G323969
TU368342 lncRNA upstream 90937 2184655 ~ 2184892 (-) True G323975
TU368350 lncRNA upstream 100850 2194568 ~ 2194827 (-) True G323983
CI01000110_01988105_01990600.mRNA mRNA downstream 101770 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_01864492_01865547.mRNA mRNA downstream 227964 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01436253_01450759.mRNA mRNA downstream 642752 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01432049_01434499.mRNA mRNA downstream 659012 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01422600_01428949.mRNA mRNA downstream 664562 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_02794268_02794597.mRNA mRNA upstream 700464 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
CI01000110_02890041_02906679.mRNA mRNA upstream 796242 2889960 ~ 2908219 (-) False CI01000110_02890041_02906679
CI01000110_03015589_03024689.mRNA mRNA upstream 921532 3015250 ~ 3025361 (-) True CI01000110_03015589_03024689
CI01000110_03084686_03087106.mRNA mRNA upstream 990721 3084439 ~ 3087106 (-) True CI01000110_03084686_03087106
CI01000110_03095980_03103572.mRNA mRNA upstream 1001738 3095456 ~ 3103572 (-) True CI01000110_03095980_03103572
TU367430 other downstream 856662 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 879121 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 1987692 103265 ~ 105819 (-) True G322580
TU369365 other upstream 1021740 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 1021740 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 1022433 3116151 ~ 3120099 (-) True G324936

Expression Profile