RNA id: TU368352


Basic Information

Item Value
RNA id TU368352
length 328
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G323985
representative True

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2201085 ~ 2201412 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATAAAATAGCCAAAGCATTACATATACACTGTATTGCCAAAAGTATTGGGACACCCCTCCAAATCACTGAATTCAGGTGTTCCAATCACTTCCATGGCCACAGGTGTATAAAATCAAGCACCTAGGCATGCAGACTGCTTCTACAAACATTTGTGAAAGAATGGGTCGCTCTCAGGAGCTCAGTGAATTCAAGCGTGGTACCGTGATAGATTGCTTCCTGTGCAATAAGTCCATTCGTGAAATTTCCTCACTACTAAATATTCCACGGTCAACTGTTAGTGGTATCATAACAAAGTGGAAGCAATTGGGAACAACAGCAATGAAGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU368350 lncRNA downstream 6258 2194568 ~ 2194827 (-) True G323983
TU368342 lncRNA downstream 16193 2184655 ~ 2184892 (-) True G323975
TU368336 lncRNA downstream 30102 2170762 ~ 2170983 (-) True G323969
TU368332 lncRNA downstream 49238 2151626 ~ 2151847 (-) True G323965
TU368329 lncRNA downstream 59014 2141605 ~ 2142071 (-) True G323962
TU368354 lncRNA upstream 2299 2203711 ~ 2206449 (-) True G323987
TU368313 lncRNA upstream 31784 2233196 ~ 2308545 (-) False G323946
TU368312 lncRNA upstream 61400 2262812 ~ 2308545 (-) True G323946
TU368404 lncRNA upstream 142464 2343876 ~ 2344209 (-) True G324034
TU368473 lncRNA upstream 229273 2430685 ~ 2430913 (-) True G324103
CI01000110_01988105_01990600.mRNA mRNA downstream 209344 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_01864492_01865547.mRNA mRNA downstream 335538 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01436253_01450759.mRNA mRNA downstream 750326 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01432049_01434499.mRNA mRNA downstream 766586 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01422600_01428949.mRNA mRNA downstream 772136 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_02794268_02794597.mRNA mRNA upstream 592770 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
CI01000110_02890041_02906679.mRNA mRNA upstream 688548 2889960 ~ 2908219 (-) False CI01000110_02890041_02906679
CI01000110_03015589_03024689.mRNA mRNA upstream 813838 3015250 ~ 3025361 (-) True CI01000110_03015589_03024689
CI01000110_03084686_03087106.mRNA mRNA upstream 883027 3084439 ~ 3087106 (-) True CI01000110_03084686_03087106
CI01000110_03095980_03103572.mRNA mRNA upstream 894044 3095456 ~ 3103572 (-) True CI01000110_03095980_03103572
TU367430 other downstream 964236 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 986695 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 2095266 103265 ~ 105819 (-) True G322580
TU369365 other upstream 914046 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 914046 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 914739 3116151 ~ 3120099 (-) True G324936

Expression Profile