RNA id: TU368473



Basic Information


Item Value
RNA id TU368473
length 229
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G324103
representative True

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2430685 ~ 2430913 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTACCAAAGAATCCACAGTGAAATGTACCGAATACAAATAAATAATGCTCAGTCGAGACATTCACATTGTTGAAAATAAATAACCATATTCCTAGCATTAGGATCCTTTGAAATGTAATGTTATTTTTAATACTGTATCGCTCTTCTCTCCTCGTCATCTCACTAACATGCCAGTGGGCGGGGCTAACATTGCGTTCATTTTCTTCTGGAGAGGCGGTCTTTCACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU368404 lncRNA downstream 86476 2343876 ~ 2344209 (-) True G324034
TU368313 lncRNA downstream 122140 2233196 ~ 2308545 (-) False G323946
TU368312 lncRNA downstream 122140 2262812 ~ 2308545 (-) True G323946
TU368354 lncRNA downstream 224236 2203711 ~ 2206449 (-) True G323987
TU368352 lncRNA downstream 229273 2201085 ~ 2201412 (-) True G323985
TU368488 lncRNA upstream 21362 2452275 ~ 2452639 (-) True G324118
TU368512 lncRNA upstream 47074 2477987 ~ 2478194 (-) True G324142
TU369164 lncRNA upstream 233274 2664187 ~ 2712243 (-) True G324755
TU369333 lncRNA upstream 458966 2893390 ~ 2893909 (-) True G324917
TU369336 lncRNA upstream 463568 2894481 ~ 2896088 (-) True G324919
CI01000110_01988105_01990600.mRNA mRNA downstream 438944 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_01864492_01865547.mRNA mRNA downstream 565138 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01436253_01450759.mRNA mRNA downstream 979926 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01432049_01434499.mRNA mRNA downstream 996186 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01422600_01428949.mRNA mRNA downstream 1001736 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_02794268_02794597.mRNA mRNA upstream 363269 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
CI01000110_02890041_02906679.mRNA mRNA upstream 459047 2889960 ~ 2908219 (-) False CI01000110_02890041_02906679
CI01000110_03015589_03024689.mRNA mRNA upstream 584337 3015250 ~ 3025361 (-) True CI01000110_03015589_03024689
CI01000110_03084686_03087106.mRNA mRNA upstream 653526 3084439 ~ 3087106 (-) True CI01000110_03084686_03087106
CI01000110_03095980_03103572.mRNA mRNA upstream 664543 3095456 ~ 3103572 (-) True CI01000110_03095980_03103572
TU367430 other downstream 1193836 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 1216295 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 2324866 103265 ~ 105819 (-) True G322580
TU369365 other upstream 684545 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 684545 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 685238 3116151 ~ 3120099 (-) True G324936

Expression Profile