RNA id: TU368512



Basic Information


Item Value
RNA id TU368512
length 208
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G324142
representative True

Chromosome Information


Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 2477987 ~ 2478194 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTATAACCCAAATTCCGGAATTGTTGGGATGTTATTTAAATTTGAATAAAATGAAAACTAAAAGACTTTCAAATCACATGAGCCAATATTTTATTCACAATAGAACATAGATAACATAACAAATGTTTAAACTGAGAAATTTTACAAATTTATGCACAAAATTAGCTCATTTCAAATTTGATGCCTGCTACAGGTCTCAAAATAGTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU368488 lncRNA downstream 25348 2452275 ~ 2452639 (-) True G324118
TU368473 lncRNA downstream 47074 2430685 ~ 2430913 (-) True G324103
TU368404 lncRNA downstream 133778 2343876 ~ 2344209 (-) True G324034
TU368313 lncRNA downstream 169442 2233196 ~ 2308545 (-) False G323946
TU368312 lncRNA downstream 169442 2262812 ~ 2308545 (-) True G323946
TU369164 lncRNA upstream 185993 2664187 ~ 2712243 (-) True G324755
TU369333 lncRNA upstream 411685 2893390 ~ 2893909 (-) True G324917
TU369336 lncRNA upstream 416287 2894481 ~ 2896088 (-) True G324919
TU369337 lncRNA upstream 418062 2896256 ~ 2896300 (-) True G324920
TU369325 lncRNA upstream 475038 2953232 ~ 2959837 (-) True G324909
CI01000110_01988105_01990600.mRNA mRNA downstream 486246 1986589 ~ 1991741 (-) True CI01000110_01988105_01990600
CI01000110_01864492_01865547.mRNA mRNA downstream 612440 1864478 ~ 1865547 (-) True CI01000110_01864492_01865547
CI01000110_01436253_01450759.mRNA mRNA downstream 1027228 1436205 ~ 1450759 (-) True CI01000110_01436253_01450759
CI01000110_01432049_01434499.mRNA mRNA downstream 1043488 1431705 ~ 1434499 (-) True CI01000110_01432049_01434499
CI01000110_01422600_01428949.mRNA mRNA downstream 1049038 1421893 ~ 1428949 (-) False CI01000110_01422600_01428949
CI01000110_02794268_02794597.mRNA mRNA upstream 315988 2794182 ~ 2794597 (-) True CI01000110_02794268_02794597
CI01000110_02890041_02906679.mRNA mRNA upstream 411766 2889960 ~ 2908219 (-) False CI01000110_02890041_02906679
CI01000110_03015589_03024689.mRNA mRNA upstream 537056 3015250 ~ 3025361 (-) True CI01000110_03015589_03024689
CI01000110_03084686_03087106.mRNA mRNA upstream 606245 3084439 ~ 3087106 (-) True CI01000110_03084686_03087106
CI01000110_03095980_03103572.mRNA mRNA upstream 617262 3095456 ~ 3103572 (-) True CI01000110_03095980_03103572
TU367430 other downstream 1241138 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 1263597 1205829 ~ 1214390 (-) False G323133
TU366784 other downstream 2372168 103265 ~ 105819 (-) True G322580
TU369365 other upstream 637264 3115458 ~ 3120099 (-) False G324936
TU369369 other upstream 637264 3115458 ~ 3120099 (-) False G324936
TU369366 other upstream 637957 3116151 ~ 3120099 (-) True G324936

Expression Profile