RNA id: TU369402


Basic Information

Item Value
RNA id TU369402
length 383
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G324966
representative True

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3279047 ~ 3279429 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAAGTCACGCCTTTCATAAGAAAAAAAAATCAAAACCGCAATATAACCTAGAGCAAAGAAAAGAAAAGAAAAAAAGAGAACAAAATTAATAAATAAAAACTTGACATCAAAAATATATGTACTGATGCGTTCTTTTGTTCAGAAGTTCGGCAAACTGAGAAGCCAATCATGGAGTTGATATGGCAGATCAGATTGTCTCACTTTATTACTTATCAAAAGAGCTCCTGGGCGTCATGAGAATATGTTATCAAAAGACAGCATGTACGAATGTGACTGGATGCGCTTGGGGCTTAATTATACATAGATAGCAATCTTGTAAAATCAGTCGACACTAATAAGACGCCCTTGTAATGGGCTTCCGTGTCTATTGAGTTTGTCAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU369488 lncRNA downstream 19838 3258988 ~ 3259209 (-) True G325047
TU369487 lncRNA downstream 20108 3258708 ~ 3258939 (-) True G325046
TU369414 lncRNA downstream 78911 3147520 ~ 3200136 (-) True G324978
TU369460 lncRNA downstream 134712 3143932 ~ 3144335 (-) True G325020
TU369459 lncRNA downstream 135168 3143516 ~ 3143879 (-) True G325019
TU369496 lncRNA upstream 4880 3284309 ~ 3284721 (-) True G325055
TU369504 lncRNA upstream 13286 3292715 ~ 3292964 (-) True G325063
TU369520 lncRNA upstream 35521 3314950 ~ 3315189 (-) True G325079
TU369535 lncRNA upstream 65428 3344857 ~ 3345105 (-) True G325094
TU369552 lncRNA upstream 80547 3359976 ~ 3360190 (-) True G325107
CI01000110_03220300_03222003.mRNA mRNA downstream 57044 3219820 ~ 3222003 (-) True CI01000110_03220300_03222003
CI01000110_03196898_03206968.mRNA mRNA downstream 72079 3196182 ~ 3206968 (-) True CI01000110_03196898_03206968
CI01000110_03152754_03157924.mRNA mRNA downstream 121123 3152465 ~ 3157924 (-) True CI01000110_03152754_03157924
CI01000110_03138199_03142034.mRNA mRNA downstream 136693 3137280 ~ 3142354 (-) True CI01000110_03138199_03142034
CI01000110_03122088_03123095.mRNA mRNA downstream 155952 3121663 ~ 3123095 (-) True CI01000110_03122088_03123095
CI01000110_03281209_03283417.mRNA mRNA upstream 333 3279762 ~ 3283849 (-) True CI01000110_03281209_03283417
CI01000110_03438821_03442595.mRNA mRNA upstream 159344 3438773 ~ 3442661 (-) True CI01000110_03438821_03442595
CI01000110_03453577_03480559.mRNA mRNA upstream 173438 3452867 ~ 3480559 (-) True CI01000110_03453577_03480559
CI01000110_03488751_03505468.mRNA mRNA upstream 207968 3487397 ~ 3505468 (-) True CI01000110_03488751_03505468
CI01000110_03523710_03531446.mRNA mRNA upstream 243911 3523340 ~ 3531446 (-) True CI01000110_03523710_03531446
TU369365 other downstream 158948 3115458 ~ 3120099 (-) False G324936
TU369369 other downstream 158948 3115458 ~ 3120099 (-) False G324936
TU369366 other downstream 158948 3116151 ~ 3120099 (-) True G324936
TU367430 other downstream 2042198 1205829 ~ 1236849 (-) True G323133
TU367428 other downstream 2064657 1205829 ~ 1214390 (-) False G323133

Expression Profile