RNA id: CI01000112_01304699_01321467.mRNA



Basic Information


Item Value
RNA id CI01000112_01304699_01321467.mRNA
length 1273
RNA type mRNA
GC content 0.46
exon number 5
gene id CI01000112_01304699_01321467
representative False

Chromosome Information


Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1304303 ~ 1321708 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTTAAAGAACAGCAAGAAGCCCTTAAGGAACACAAGGAGAAATGTGATTTCTCTCCTCCCCTTGCTCTTTCTTTTCTTTTCTCTTTGTTCTTCCGGCTCTCCCTTCTCTCTCCCCCCACTCTCGCCATATCCATCTATCTCTATTTCTCTCCTGCCCTTTCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACTGTATGCACATTCCCCCTCCCTATTTTTCTAATTTTCCTGAGGACAGAGCAGCTTGGCACATGACATTGATTTCCATCAGGGTTTGGAAATAACCTCGCTGTTGCCCAGGCAACCCACATTTACCTTTTCTGTCTTTTTTGCATATTGGTGCGAGTTTTTCCATCAGTGAGGGAACAAATGTGGAACGGTGATGACAAATGTGCTCAGGGACTGGCATTACCAGACCTTGAGCTCTGCCCTGTGGCAGGCACTGTTTGCTCGCCCCGATTGGGGGCCGCCTGGACAGGTCAACAGTTTGGCTTCCAGAGCTTTGATCCTAATTGCCATATTATGAACTTTAAATCACTTATGTCTAGAAGTCAGTATAGTGAGAGTCCAGAGAGAGTGCCAGAGTCCTCACATAGTCAGAGTCCTGCACATAGTCGGTGGACAAGTGCAGTTCCTGCATTAACTCTGGGTCAGGACTACCCTCGTGCAGATCTTTCAGTGCTTTGGCCTGATAGACTTCCAGGATGCTCCACCTGGGGAATGTCCCTGCACTGCCCCACCATCAAGGGTAGTGAGGATGGAGGGGCCTGCAAAGTGAAGAAAGGTGCCTTCCATGACTTTGAGATATCCTCGTGCACTAGCGTGAAGCATGACCAATCGTCCAGCCAGTCCACTCTAGCCCAATGCTGCGGCTGCCCGGGAAAGCACGGCTCCAACTCTGCATCAGCCTCAGACTGTGCTGTCACACTCGAAGGAAAATGGGTAGAAAATTGGTGTCTGCCCATCACTATGCCTGAGAATAGGGTCATAACTATAGATTTATAACTATATTCAAGATTTATTTAGGCTTACAGTCTAGATATAAAACTCAGATATGCAATCTCAGAGGTATTGTCAGCCACTATTGAAATAACCTTTTAATGGCATATTTTCCACTTTCTTGTAACTTACTGAATATACACACATGCCCAAGGAGACAGATTACTTCATTTACTATTAATTTCTCTCTCCCTCTGCTGGAGGCTCCTGGTGAAATGACATTTTGATTATTTCCATAGCTGGATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU373388 lncRNA upstream 4649 1299347 ~ 1299654 (+) True G328511
TU373383 lncRNA upstream 15875 1288074 ~ 1288428 (+) True G328506
TU373381 lncRNA upstream 17812 1286097 ~ 1286491 (+) True G328504
TU373372 lncRNA upstream 29469 1274603 ~ 1274834 (+) True G328495
TU373334 lncRNA upstream 69413 1234606 ~ 1234890 (+) True G328459
TU373349 lncRNA downstream 361 1322069 ~ 1322699 (+) True G328473
TU373397 lncRNA downstream 17827 1339535 ~ 1339865 (+) True G328520
TU373350 lncRNA downstream 23652 1345360 ~ 1346038 (+) True G328474
TU373483 lncRNA downstream 110815 1432523 ~ 1433040 (+) True G328599
TU373484 lncRNA downstream 111685 1433393 ~ 1433872 (+) True G328600
CI01000112_00975908_00994568.mRNA mRNA upstream 308238 975908 ~ 996065 (+) False CI01000112_00975908_00994568
CI01000112_00967726_00973214.mRNA mRNA upstream 330824 967726 ~ 973479 (+) True CI01000112_00967726_00973214
CI01000112_00943876_00960636.mRNA mRNA upstream 343667 943876 ~ 960636 (+) True CI01000112_00943876_00960636
CI01000112_00931318_00942127.mRNA mRNA upstream 361918 931147 ~ 942385 (+) True CI01000112_00931318_00942127
CI01000112_00857771_00878662.mRNA mRNA upstream 424677 856598 ~ 879626 (+) True CI01000112_00857771_00878662
CI01000112_01473681_01484126.mRNA mRNA downstream 151649 1473357 ~ 1484634 (+) True CI01000112_01473681_01484126
CI01000112_01493953_01497856.mRNA mRNA downstream 172245 1493953 ~ 1498684 (+) True CI01000112_01493953_01497856
CI01000112_01534218_01550547.mRNA mRNA downstream 212510 1534218 ~ 1550876 (+) True CI01000112_01534218_01550547
CI01000112_01711753_01717045.mRNA mRNA downstream 389524 1711232 ~ 1717114 (+) True CI01000112_01711753_01717045
CI01000112_01753138_01753764.mRNA mRNA downstream 431248 1752956 ~ 1754407 (+) True CI01000112_01753138_01753764
TU373329 other upstream 71185 1232022 ~ 1233118 (+) True G328456
TU374096 other downstream 1295996 2617704 ~ 2618151 (+) False G329125
TU374097 other downstream 1295996 2617704 ~ 2618151 (+) False G329125
TU374098 other downstream 1295996 2617704 ~ 2618151 (+) True G329125
TU374184 other downstream 1598546 2920254 ~ 2931889 (+) True G329194
TU375960 other downstream 3763012 5084720 ~ 5096971 (+) True G330755

Expression Profile