RNA id: CI01000112_02830996_02831270.mRNA



Basic Information


Item Value
RNA id CI01000112_02830996_02831270.mRNA
length 1427
RNA type mRNA
GC content 0.39
exon number 1
gene id CI01000112_02830996_02831270
representative True

Chromosome Information


Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2829844 ~ 2831270 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTCTGCTGACGGTGTCTGGTGTGAGCATCTATATCAGTTACTCTCAGCAGGCTTTGGAAGAGCTGCAGCTCACGGTAGATATGGAGTCACTGGCTCACGTCCACATGTCCTTCGGCTGGTCTCTAGTCATGGCATGTCTGTCCTTCTGCCTGGAGCTGCTCACTGGGATCCTGCTCATTCTAGCGGCCCGTCTCATCCACCGGCAGTGCCACCATGAACCTGCTGCTGTGTTCTCCATGAGCCAGAGTTCACCACAGATGCTGAGACTGCAGTGATGATGATGATGTTGTCTCTATTCACATGCTTTTCATCCACAGTTTGATCAGGAAATGAGTTTGTGCTGTGTCAAAGTTGAAATGAAGAGTGCCGGGTGGCAAATGAGACAGCTGCATCAATTATTGAAGGAGAGGCTCACTCGAGGACTGCAAAATTTGTCTGCATCACTCGACTGTTTCTGTGCAATCACGTTTTCCTCAAGACTTCTTGAAACACGTTTTCCTCTGCTCACCAATGTCATGTGTCATGCGTTTATGGTATATAACATGATGAATCAAGCCATTGAAGCTTTTACATGTAGTATCTCAAGACACATTTTTACAGAATAGTGTATTTTTTCCCCTTTTGTCAAACAACAAAATAGTTGATATTTCATAGTGGTGTATCTGTCAGATAAGTAATGAACAATTTTGGTAAAAGTATATACAGTATATATAAAAGTTCAGGGTCAGAAAGATGACACGACTTTTTCAAAAACATTAAAAAAAGTCTTTCCGACCCCAAACCTTTGAATGGTAGTGTATGTGAAACCCATACACCTCACCCATATGTGCTTATTGTATATTAATTCTGTTGCTACTGATTATAATGAGCCAAGTTTTTAAATTACTTTACTTGTGGTCACACCGATACTAATACATTTTATAGGAGTTTTAATACTATACGGTGACCAGGAGGGGACATGTTCGGTTCACTTAGTTTTGCTATGGCTACGACATATTAACTCATGGGAACGTGATATCTGATATGTCATGGCCACGAAATCATTTTGTCGAGGTAACACATCCTTATGTTGTGCGATGCGATGTGAAGTCAAGATGCCGATGTTGAGGGAACGACATATTTTTCTTGTGGCCATGACTTCTATTTATAATGTATATTAAAGGCCTACCATTATATTAGGCCTATATCATATTGCGCTCAATGTTGCCTATAGACAGCGTTCAAATGAAGTTTGTTGTTATCAGTAAATGTTTAAAGAATGTGTAAGAACATAAAATAATATAGGCCTACAATATATATTTTTTTTATCCATCCCATCCCACAGCATTTTAAATCACTAATTATGTCTTTTTTATTTATTATTATTATTAATATTATTATTATATAGGCACCTATAGCCTAGCCTATTAATTACTAGCCAAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU375160 lncRNA downstream 9713 2819912 ~ 2820131 (-) True G330050
TU375139 lncRNA downstream 48707 2780912 ~ 2781137 (-) True G330029
TU375061 lncRNA downstream 65163 2764407 ~ 2764681 (-) True G329956
TU375031 lncRNA downstream 74738 2748214 ~ 2755106 (-) True G329928
TU375014 lncRNA downstream 100119 2659906 ~ 2729725 (-) True G329911
TU375123 lncRNA upstream 14435 2845705 ~ 2852394 (-) True G330013
TU375176 lncRNA upstream 63787 2895057 ~ 2895482 (-) True G330063
TU375110 lncRNA upstream 172518 3003788 ~ 3005219 (-) True G330000
TU375203 lncRNA upstream 247116 3078386 ~ 3082355 (-) True G330082
TU375200 lncRNA upstream 253923 3085193 ~ 3087086 (-) True G330081
CI01000112_02732722_02733132.mRNA mRNA downstream 95404 2732580 ~ 2734440 (-) True CI01000112_02732722_02733132
CI01000112_02630198_02636420.mRNA mRNA downstream 193416 2629837 ~ 2636428 (-) True CI01000112_02630198_02636420
CI01000112_02425312_02445848.mRNA mRNA downstream 383996 2425062 ~ 2445848 (-) True CI01000112_02425312_02445848
CI01000112_02412957_02416960.mRNA mRNA downstream 412884 2412937 ~ 2416960 (-) False CI01000112_02412957_02416960
CI01000112_02324515_02338662.mRNA mRNA downstream 490755 2324389 ~ 2339089 (-) True CI01000112_02324515_02338662
CI01000112_02835153_02836999.mRNA mRNA upstream 3633 2834903 ~ 2838073 (-) True CI01000112_02835153_02836999
CI01000112_02858213_02875740.mRNA mRNA upstream 26815 2858085 ~ 2875740 (-) True CI01000112_02858213_02875740
CI01000112_02887084_02894055.mRNA mRNA upstream 55404 2886674 ~ 2894589 (-) True CI01000112_02887084_02894055
CI01000112_02930571_02969824.mRNA mRNA upstream 99179 2930449 ~ 2969824 (-) True CI01000112_02930571_02969824
CI01000112_03068505_03072256.mRNA mRNA upstream 236975 3068245 ~ 3072879 (-) False CI01000112_03068505_03072256
TU374741 other downstream 810391 2016704 ~ 2019453 (-) True G329672
TU374625 other downstream 831985 1991666 ~ 1997859 (-) True G329569
TU374607 other downstream 1020105 1798016 ~ 1809739 (-) False G329559
TU374601 other downstream 1020105 1809220 ~ 1809739 (-) True G329559
TU374605 other downstream 1029186 1798016 ~ 1800658 (-) False G329559
TU375077 other upstream 236050 3067320 ~ 3072730 (-) False CI01000112_03068505_03072256
TU375076 other upstream 236556 3067826 ~ 3072730 (-) True CI01000112_03068505_03072256
TU375127 other upstream 673185 3518826 ~ 3519083 (-) True G330017
TU375455 other upstream 928529 3759799 ~ 3768605 (-) False G330301

Expression Profile