RNA id: TU372764


Basic Information

Item Value
RNA id TU372764
length 275
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G327957
representative True

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1005676 ~ 1005950 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATATGTTGAATAAAGACCCGGAGTCAGAGTTTAAAAAAAAAAATAAATAAATTGAAGAAAATTTTACTGAAGAATAGTTTGCAGTTTCATCAGCAGAATCCAGCTTCAAGTCTCACAAGGAGTTCGTAGGCCGCTCTGCGTACATTCACATTTCCACAACAATTATACTCTAACAGAATCAACTAACTACGTCATTACTTCAGGTTGAATGATTCTGATTGGCTAAGAAAAACAGACAAATTTGGCAATCTTCCACACATGGACAGATAGTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU372762 lncRNA upstream 968 1004466 ~ 1004708 (+) True G327955
TU372761 lncRNA upstream 1566 1003910 ~ 1004110 (+) True G327954
TU372483 lncRNA upstream 10236 995194 ~ 995440 (+) True CI01000112_00975908_00994568
TU372480 lncRNA upstream 80598 918747 ~ 925078 (+) True G327692
TU372491 lncRNA upstream 92255 912414 ~ 913421 (+) True G327703
TU372765 lncRNA downstream 2569 1008519 ~ 1008733 (+) True G327958
TU372766 lncRNA downstream 15386 1021336 ~ 1021557 (+) True G327959
TU372767 lncRNA downstream 15629 1021579 ~ 1022652 (+) True G327960
TU372790 lncRNA downstream 52343 1058293 ~ 1064734 (+) True G327980
TU372768 lncRNA downstream 96259 1102209 ~ 1108997 (+) True G327961
CI01000112_00975908_00994568.mRNA mRNA upstream 9611 975908 ~ 996065 (+) False CI01000112_00975908_00994568
CI01000112_00967726_00973214.mRNA mRNA upstream 32197 967726 ~ 973479 (+) True CI01000112_00967726_00973214
CI01000112_00943876_00960636.mRNA mRNA upstream 45040 943876 ~ 960636 (+) True CI01000112_00943876_00960636
CI01000112_00931318_00942127.mRNA mRNA upstream 63291 931147 ~ 942385 (+) True CI01000112_00931318_00942127
CI01000112_00857771_00878662.mRNA mRNA upstream 126050 856598 ~ 879626 (+) True CI01000112_00857771_00878662
CI01000112_01304699_01321467.mRNA mRNA downstream 298353 1304303 ~ 1321708 (+) False CI01000112_01304699_01321467
CI01000112_01473681_01484126.mRNA mRNA downstream 467407 1473357 ~ 1484634 (+) True CI01000112_01473681_01484126
CI01000112_01493953_01497856.mRNA mRNA downstream 488003 1493953 ~ 1498684 (+) True CI01000112_01493953_01497856
CI01000112_01534218_01550547.mRNA mRNA downstream 528268 1534218 ~ 1550876 (+) True CI01000112_01534218_01550547
CI01000112_01711753_01717045.mRNA mRNA downstream 705282 1711232 ~ 1717114 (+) True CI01000112_01711753_01717045
TU373329 other downstream 226072 1232022 ~ 1233118 (+) True G328456
TU374096 other downstream 1611754 2617704 ~ 2618151 (+) False G329125
TU374097 other downstream 1611754 2617704 ~ 2618151 (+) False G329125
TU374098 other downstream 1611754 2617704 ~ 2618151 (+) True G329125
TU374184 other downstream 1914304 2920254 ~ 2931889 (+) True G329194

Expression Profile