RNA id: TU374125


Basic Information

Item Value
RNA id TU374125
length 241
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G329145
representative True

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2772501 ~ 2772741 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCTGGGCAACAAACTCAAGCTCCTCTTCTCTTATATCAAAATCCTCCAACATTTCTCTTTAAAAATTCTCGTTTTAGACTTCTAATTTGTGACCGGTGTTTTGTTTTGCTCTATCCTCTGCACTTCCGTGTTCATCAATACACCATACGTTGTATCAGAAGTTACTCTTTTGGCATAAGTTGATTTGCGTAGGCCGTCTGCTGGATGCTAGTTATATTCGTTTATAAAGATTTAAATGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU374064 lncRNA upstream 119140 2650374 ~ 2653361 (+) True G329097
TU374065 lncRNA upstream 230204 2541667 ~ 2542297 (+) True G329098
TU374031 lncRNA upstream 347303 2423842 ~ 2425198 (+) True G329067
TU374044 lncRNA upstream 359788 2412411 ~ 2412713 (+) True G329080
TU374043 lncRNA upstream 361781 2410495 ~ 2410720 (+) True G329079
TU374131 lncRNA downstream 12299 2785040 ~ 2785269 (+) True G329151
TU374133 lncRNA downstream 15686 2788427 ~ 2788857 (+) True G329153
TU374068 lncRNA downstream 90344 2863085 ~ 2868729 (+) True G329101
TU374166 lncRNA downstream 128445 2901186 ~ 2901402 (+) True G329184
TU374172 lncRNA downstream 145208 2917949 ~ 2918168 (+) True G329190
CI01000112_02740099_02758394.mRNA mRNA upstream 14107 2740099 ~ 2758394 (+) True CI01000112_02740099_02758394
CI01000112_02659891_02661832.mRNA mRNA upstream 110486 2659891 ~ 2662015 (+) True CI01000112_02659891_02661832
CI01000112_02585528_02607525.mRNA mRNA upstream 164833 2584929 ~ 2607668 (+) True CI01000112_02585528_02607525
CI01000112_02565726_02573879.mRNA mRNA upstream 198395 2565508 ~ 2574106 (+) True CI01000112_02565726_02573879
CI01000112_02541564_02549213.mRNA mRNA upstream 223057 2540950 ~ 2549444 (+) True CI01000112_02541564_02549213
CI01000112_02774549_02777028.mRNA mRNA downstream 715 2773456 ~ 2778631 (+) True CI01000112_02774549_02777028
CI01000112_02992698_02995752.mRNA mRNA downstream 217080 2989821 ~ 2996663 (+) True CI01000112_02992698_02995752
CI01000112_03085161_03094204.mRNA mRNA downstream 312420 3085161 ~ 3094406 (+) True CI01000112_03085161_03094204
CI01000112_03100235_03105799.mRNA mRNA downstream 326707 3099448 ~ 3106273 (+) True CI01000112_03100235_03105799
CI01000112_03112349_03117520.mRNA mRNA downstream 339608 3112349 ~ 3117587 (+) True CI01000112_03112349_03117520
TU374096 other upstream 154350 2617704 ~ 2618151 (+) False G329125
TU374097 other upstream 154350 2617704 ~ 2618151 (+) False G329125
TU374098 other upstream 154350 2617704 ~ 2618151 (+) True G329125
TU373329 other upstream 1539383 1232022 ~ 1233118 (+) True G328456
TU374184 other downstream 147513 2920254 ~ 2931889 (+) True G329194
TU375960 other downstream 2311979 5084720 ~ 5096971 (+) True G330755

Expression Profile