RNA id: TU376054



Basic Information


Item Value
RNA id TU376054
length 495
lncRNA type antisense_over
GC content 0.45
exon number 2
gene id G330832
representative True

Chromosome Information


Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 5216239 ~ 5221083 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TACGTTTAAAGTCACAGCATCAGAGTATTTCTCTCCATGTTCATTGATGCACTTGCACTTGTATTCTCCACTGTCATCAGAGCTGATCTTTGAGATGCTGTAGATTCTTCCAGATCCTACAAACATTCCTCCTTTAAACCAGCTGAAGTTCAGAGCAGGTGGGTTTGTATCACTGCTGCAGCTCAGAGTCACTGAATCTCCTGACACTATTTCAGATGGACTGATGGACACTGAGACGCTTTTTGGAGGATCTAACAACGTGACATTGAGGTAAACAGCGGGAGAGATGTGATTGTGTCCGTGTACAGCACAGCTATATCTGCCTGCATCCTCTCTTCTGACTGACTGCAGCAGCAGTTCATTGTTTCTGTCTCTTCTTTCAGTTAATGGCTGTGAGTTTCTGTACCAGATGAATGTTGCTCTGTCAGTCAGAATGCAGCTGCTTTTACATGTCAGACGGACTGAATGTCCCTCTGTCACTCTCTCAGGAGACTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU376013 lncRNA upstream 25552 5147230 ~ 5190687 (+) True G330798
TU376007 lncRNA upstream 89414 5126587 ~ 5126825 (+) True G330793
TU376003 lncRNA upstream 145325 5070091 ~ 5070914 (+) True G330789
TU376002 lncRNA upstream 149385 5066499 ~ 5066854 (+) True G330788
TU376000 lncRNA upstream 152948 5063086 ~ 5063291 (+) True G330786
CI01000112_05204626_05208453.mRNA mRNA upstream 7372 5204626 ~ 5208867 (+) True CI01000112_05204626_05208453
CI01000112_05172320_05174322.mRNA mRNA upstream 41762 5172188 ~ 5174477 (+) True CI01000112_05172320_05174322
CI01000112_05163850_05164401.mRNA mRNA upstream 51709 5163850 ~ 5164530 (+) True CI01000112_05163850_05164401
CI01000112_05102672_05120797.mRNA mRNA upstream 95368 5102672 ~ 5120871 (+) True CI01000112_05102672_05120797
CI01000112_05076817_05101845.mRNA mRNA upstream 114394 5076817 ~ 5101845 (+) False CI01000112_05076817_05101845
TU375960 other upstream 118816 5084720 ~ 5096971 (+) True G330755
TU374184 other upstream 2284350 2920254 ~ 2931889 (+) True G329194
TU374096 other upstream 2598088 2617704 ~ 2618151 (+) False G329125

Expression Profile