RNA id: CI01000113_01424978_01425704.mRNA



Basic Information


Item Value
RNA id CI01000113_01424978_01425704.mRNA
length 419
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000113_01424978_01425704
representative False

Chromosome Information


Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1424968 ~ 1425835 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGCCATCACAACCAGATACTGCCAGAAGGAGCTGGAGGAATATGGTGGCTGTGTTGTGTCTCATCCAGCATCATGGCAAGAGAAGTGTCTAGACCTGAAGCTGAAGGTGGCACAGTGCACTTCATCACACAAATGCTGCGCCTCTGCCCACATAGATGTTTTTGTTATTGTTCTGTCTAATGAGGACAATAGCACAGGTGTTTTATACTCAATACTGGGAAGATACGGATTATGGAAATATTATCTTTTGAAGAACTGCAACACACAAAAACAAGAACAGACATAAATCTTTTGCACACCTTTTTTTTCAAACTGTTTAATGTGATATTTGATTTGTTTTGTTTTTGGAACTTTTCATACTATTTATGAGAGAAATCATTTTTAAAAGTTTCCATGATATTAAAACATGAAGTCGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU376955 lncRNA upstream 25316 1393245 ~ 1399662 (+) True G331611
TU377049 lncRNA upstream 35427 1389312 ~ 1389551 (+) True G331702
TU377039 lncRNA upstream 57056 1365818 ~ 1367922 (+) True G331692
TU377007 lncRNA upstream 146178 1276338 ~ 1278800 (+) True G331661
TU376915 lncRNA upstream 167120 1257188 ~ 1257858 (+) True G331583
TU377056 lncRNA downstream 62726 1488561 ~ 1491072 (+) True G331709
TU377079 lncRNA downstream 118012 1543847 ~ 1544077 (+) True G331732
TU377082 lncRNA downstream 129376 1555211 ~ 1555470 (+) True G331735
TU377084 lncRNA downstream 141994 1567829 ~ 1568207 (+) True G331737
TU377093 lncRNA downstream 159863 1585698 ~ 1586327 (+) False G331744
CI01000113_01376249_01385209.mRNA mRNA upstream 39576 1374067 ~ 1385402 (+) True CI01000113_01376249_01385209
CI01000113_01329811_01334714.mRNA mRNA upstream 90243 1328883 ~ 1334735 (+) True CI01000113_01329811_01334714
CI01000113_01321501_01326215.mRNA mRNA upstream 98628 1321356 ~ 1326350 (+) True CI01000113_01321501_01326215
CI01000113_01292096_01298082.mRNA mRNA upstream 125059 1291953 ~ 1299919 (+) True CI01000113_01292096_01298082
CI01000113_01127641_01134250.mRNA mRNA upstream 290497 1127641 ~ 1134481 (+) True CI01000113_01127641_01134250
CI01000113_01507537_01509522.mRNA mRNA downstream 81702 1507537 ~ 1509522 (+) True CI01000113_01507537_01509522
CI01000113_01510550_01513751.mRNA mRNA downstream 84715 1510550 ~ 1514206 (+) True CI01000113_01510550_01513751
CI01000113_01515238_01529826.mRNA mRNA downstream 89336 1515171 ~ 1529951 (+) True CI01000113_01515238_01529826
CI01000113_01530888_01533572.mRNA mRNA downstream 104956 1530791 ~ 1533572 (+) True CI01000113_01530888_01533572
CI01000113_01547153_01553082.mRNA mRNA downstream 120901 1546736 ~ 1553786 (+) True CI01000113_01547153_01553082
TU376961 other upstream 178405 1246291 ~ 1246573 (+) True G331615
TU376797 other upstream 502845 917735 ~ 922133 (+) True G331487
TU376780 other upstream 508441 913392 ~ 916537 (+) True G331470
TU376556 other upstream 1090357 334158 ~ 334621 (+) True G331260
TU377162 other downstream 236950 1662785 ~ 1663255 (+) True G331767
TU377129 other downstream 242167 1668002 ~ 1668035 (+) True G331759
TU377145 other downstream 242167 1668002 ~ 1782301 (+) True G331759
TU377135 other downstream 400322 1828809 ~ 1828903 (+) True G331759
TU377377 other downstream 917586 2351665 ~ 2351870 (+) True G331958

Expression Profile