RNA id: CI01000127_02195670_02218131.mRNA



Basic Information


Item Value
RNA id CI01000127_02195670_02218131.mRNA
length 1402
RNA type mRNA
GC content 0.42
exon number 3
gene id CI01000127_02195670_02218131
representative True

Chromosome Information


Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2195495 ~ 2218779 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGATAAATAACAATAATTTATCCCATGAGAGTGCTGCATGCGTGTGACCTCACAGCGAGCTACATGACTACATACTAACACAAGCCACCCTGGGCTTTTAAAGATGCCGTGCCAAGTGCAGCTCCTCCTTTAGGGGGCGTAGCAGAGCCACACAAATGGATTTACAACAACCCCGATGCTTCAAATAACCACATTTGACATGCTTTGCATTAATGACACCCATAAATGTTGCAGACTTCATATAGACAAAGGGTTACTTTTGTCATCAGTTTTTCATAATCGTGGTCACCAGTTTGTGGACCTGGTGAAAGTCATCATGCAGTTATCAGATTTAAGTAACACTGCCGCATCACTCAAACACTCACAATACAACATCAACACCAACAACAACATAAAAAAAACGGCAGGGACATATCTGTGTGGTTACTGTGTAGACGGGTTTAGCGTAGTTAAAAACTCCTCAAAGCACGATCTGTCCCACAGCGCTCGCTGTCTCATCCCATCTCATCCCTGCGATCCTGTTGCCCATCATCTGAGGAGGCCTGTTGGCTCAGAGATGGCCGTCATTCTAGCCGGCTCTCATTGGGCTAGTTCTGCCCGGCTGTTCTCTGAGGATGTGGCTGGAGGTGCCGGGGCAGATCAGAAAGCTTGCGTTGACACCATCCGCAGACGCCGCAGAGAGCCACCAGCCAAACGCCACACACGGTTACCGCCAACGACACCAGCAGCACGCTCAAAGAGAAGGAGCCTGTGAAACACACACACGGTGTTAATATCTGAGTGGAGGGGAAACAGTCTGACATTTACTCTGACGAGAACGCTAAGAGTTTATGAAGTCTCTGAAGTCCTAAAGATGGATCAATAGTTTTCACGGTGGGAGCAAATGTGACTGGAGAACAAAATCAGAAAGGGGAGGAAAATACATTTTGGAGAGGGAAAGAGGGAGCACTCAAAAAAATGATTTTTTTTGATGCTGTTCACTTTATTTAAACAACTTATTTTGATTCAACACAATTGTATTAGGTTTCTGGTTCAAATTTAATTGCTTCATGTTAAATTGACTTGAAACGATTACTTTTTGACTTAACTTGATGTTTTCATATTAAAATAACATGTTTCAATCAAGTAAACTCAACCAGGACTTAATCAAACAGGACTTTCACTTCCCATCATGCTTTGCAAAGGGGCTGATCTGGGAGAGTAAATGTTGAAATAAAGTGTTATTTTAAGCAGTTTTTAGCAACATGAGAAAATAGAGAGACTTTTTAATGTTTACTGTTCTATTATGTTGGTATTTAAAAGTTTCTGTTATGTTAATAGTTTTGGGGTTACCATTGTGGAGAAGTGTAGAACATGTGCTTGGGTTGAGGACCTGCTAACAACAATTAAAGTTGTTTTAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU387821 lncRNA upstream 42220 2150640 ~ 2153275 (+) True G340800
TU387807 lncRNA upstream 78201 2044950 ~ 2117294 (+) True G340789
TU387915 lncRNA downstream 79322 2298101 ~ 2299702 (+) True G340889
TU387916 lncRNA downstream 88180 2306959 ~ 2316097 (+) False G340890
TU387918 lncRNA downstream 91451 2310230 ~ 2316097 (+) False G340890
TU387920 lncRNA downstream 94052 2312831 ~ 2316097 (+) True G340890
TU387926 lncRNA downstream 100350 2319129 ~ 2319452 (+) True G340895
CI01000127_02186896_02189070.mRNA mRNA upstream 5724 2186801 ~ 2189771 (+) False CI01000127_02186896_02189070
CI01000127_02104870_02106881.mRNA mRNA upstream 88318 2104870 ~ 2107177 (+) True CI01000127_02104870_02106881
CI01000127_02075266_02086856.mRNA mRNA upstream 108020 2075266 ~ 2087475 (+) True CI01000127_02075266_02086856
CI01000127_02036889_02038557.mRNA mRNA upstream 155974 2036889 ~ 2039521 (+) True CI01000127_02036889_02038557
CI01000127_01944313_01948146.mRNA mRNA upstream 247349 1944313 ~ 1948146 (+) True CI01000127_01944313_01948146
CI01000127_02352702_02353332.mRNA mRNA downstream 133923 2352702 ~ 2353593 (+) False CI01000127_02352702_02353332
CI01000127_02443481_02466467.mRNA mRNA downstream 224119 2442898 ~ 2466969 (+) True CI01000127_02443481_02466467
CI01000127_02467913_02475731.mRNA mRNA downstream 249134 2467913 ~ 2476306 (+) True CI01000127_02467913_02475731
CI01000127_02477517_02488780.mRNA mRNA downstream 258738 2477517 ~ 2489109 (+) True CI01000127_02477517_02488780
CI01000127_02532996_02543896.mRNA mRNA downstream 314217 2532996 ~ 2543950 (+) True CI01000127_02532996_02543896
TU387833 other upstream 6731 2177248 ~ 2177727 (+) True G340812
TU387432 other upstream 1071345 1062786 ~ 1124150 (+) True G340487
TU387430 other upstream 1090841 988203 ~ 1104654 (+) False G340487
TU387359 other upstream 1360452 834385 ~ 835043 (+) True G340421
TU387360 other upstream 1360452 830680 ~ 835043 (+) False CI01000127_00829615_00833490
TU387980 other downstream 271779 2490558 ~ 2512877 (+) False G340939

Expression Profile