RNA id: CI01000127_02352702_02353332.mRNA



Basic Information


Item Value
RNA id CI01000127_02352702_02353332.mRNA
length 596
RNA type mRNA
GC content 0.36
exon number 2
gene id CI01000127_02352702_02353332
representative False

Chromosome Information


Item Value
chromosome id CI01000127
NCBI id null
chromosome length 2607226
location 2348712 ~ 2353593 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAGTGGAGATGATGGATCTGATTCATGCTCTCTGGGAAGTTCTGCTTACGGTTCATTCAGATCACGATCAGGAACAGAAACAGTTTTCAGTTCATCACGTTCCAGAGATTCATCTCATACAAGATACGAGTCAGGGGACATAAAACTATATAACAGTATGGAATGGCTACCACCAACCAATCACTATCATCAGCAGTTTTTAGCTCATCATGCTCAAAATCTCACAGCTCAGGATTCGGGTCTTTGCGGTCCATCCCGGAGTCTGAGGAACGTTCAGGAACCAGATGAACACTTGCTCTGCCCAAGATCCCAAAACTTTTCCCAAGAAGAGTAAAGAAGCATGATAAAATTGAAGACACTGAGAACTTGAATTATATCAAATTAATGAAAGAGTCTTTGAATGTGTCTTTAAATGTTGACATTTATAGTTTTGACAATATTTAATGATAAATATTACTAAAACTAAAAGTTACATGCAGTTGTTTTAACCTTGAGTGATGAAGTTAATAGTAATTCACATTAGCAGAGCTGTAACAAATATATTGATACGTAATTTTGATTATTTTGTTTGATTATTTTGTCATAGATTTGTCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU387859 lncRNA upstream 9747 2339637 ~ 2342955 (+) False G340834
TU387858 lncRNA upstream 9747 2339708 ~ 2342955 (+) True G340834
TU387928 lncRNA upstream 32375 2320067 ~ 2320327 (+) True G340897
TU387927 lncRNA upstream 32847 2319573 ~ 2319855 (+) True G340896
TU387926 lncRNA upstream 33250 2319129 ~ 2319452 (+) True G340895
TU387941 lncRNA downstream 823 2354416 ~ 2383863 (+) True G340908
TU387945 lncRNA downstream 20463 2374056 ~ 2389853 (+) False G340912
TU387946 lncRNA downstream 34786 2388379 ~ 2389853 (+) True G340912
TU387967 lncRNA downstream 81626 2435219 ~ 2435749 (+) True G340929
TU387968 lncRNA downstream 85613 2439206 ~ 2439422 (+) True G340930
CI01000127_02195670_02218131.mRNA mRNA upstream 133923 2195495 ~ 2218779 (+) True CI01000127_02195670_02218131
CI01000127_02186896_02189070.mRNA mRNA upstream 162931 2186801 ~ 2189771 (+) False CI01000127_02186896_02189070
CI01000127_02104870_02106881.mRNA mRNA upstream 245525 2104870 ~ 2107177 (+) True CI01000127_02104870_02106881
CI01000127_02075266_02086856.mRNA mRNA upstream 265227 2075266 ~ 2087475 (+) True CI01000127_02075266_02086856
CI01000127_02036889_02038557.mRNA mRNA upstream 313181 2036889 ~ 2039521 (+) True CI01000127_02036889_02038557
CI01000127_02443481_02466467.mRNA mRNA downstream 89305 2442898 ~ 2466969 (+) True CI01000127_02443481_02466467
CI01000127_02467913_02475731.mRNA mRNA downstream 114320 2467913 ~ 2476306 (+) True CI01000127_02467913_02475731
CI01000127_02477517_02488780.mRNA mRNA downstream 123924 2477517 ~ 2489109 (+) True CI01000127_02477517_02488780
CI01000127_02532996_02543896.mRNA mRNA downstream 179403 2532996 ~ 2543950 (+) True CI01000127_02532996_02543896
TU387833 other upstream 163938 2177248 ~ 2177727 (+) True G340812
TU387432 other upstream 1228552 1062786 ~ 1124150 (+) True G340487
TU387430 other upstream 1248048 988203 ~ 1104654 (+) False G340487
TU387359 other upstream 1517659 834385 ~ 835043 (+) True G340421
TU387980 other downstream 136965 2490558 ~ 2512877 (+) False G340939

Expression Profile