RNA id: TU410673



Basic Information


Item Value
RNA id TU410673
length 227
lncRNA type intronic
GC content 0.34
exon number 1
gene id G360041
representative True

Chromosome Information


Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2959046 ~ 2959272 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTACTAGCTTTTTCCACAACACCTTGTCATGTCATTGAAGTAGTGCATATTTACGTACAGTATATGAATAATCATTTGAAGCGTATTGTATGTTTTATACACAGCGAAAATAGCCTGTATTTGACCGAAATTCCAGAATTGTCAGCAAGCTAACTATCTAGATGGCGCAGTGAATGTTTATATGGTTGTCAATAAATTGGATGCTAAATATCATTTTGGCTTCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU410658 lncRNA downstream 8095 2950604 ~ 2950951 (-) True G360026
TU410670 lncRNA downstream 20639 2937935 ~ 2938407 (-) True G360038
TU410669 lncRNA downstream 23544 2935268 ~ 2935502 (-) True G360037
TU410667 lncRNA downstream 30672 2928148 ~ 2928374 (-) True G360035
TU410664 lncRNA downstream 35681 2922829 ~ 2923365 (-) True G360032
TU410674 lncRNA upstream 552 2959824 ~ 2960219 (-) True G360042
TU410675 lncRNA upstream 1513 2960785 ~ 2961125 (-) True G360043
TU410680 lncRNA upstream 15074 2974346 ~ 2974592 (-) True G360048
TU410681 lncRNA upstream 15574 2974846 ~ 2975083 (-) True G360049
TU410682 lncRNA upstream 16271 2975543 ~ 2975843 (-) True G360050
CI01000152_02440117_02451100.mRNA mRNA downstream 507224 2440117 ~ 2451822 (-) True CI01000152_02440117_02451100
CI01000152_02427978_02434593.mRNA mRNA downstream 524453 2427519 ~ 2434593 (-) True CI01000152_02427978_02434593
CI01000152_02334753_02345817.mRNA mRNA downstream 613229 2334168 ~ 2345817 (-) True CI01000152_02334753_02345817
CI01000152_02190690_02206511.mRNA mRNA downstream 752388 2190682 ~ 2206658 (-) True CI01000152_02190690_02206511
CI01000152_02086974_02089993.mRNA mRNA downstream 868996 2086488 ~ 2090050 (-) False CI01000152_02086974_02089993
TU410417 other downstream 499210 2368992 ~ 2459836 (-) True G359800
TU410397 other downstream 640312 2318268 ~ 2318734 (-) True G359788
TU409936 other downstream 934208 2024633 ~ 2024838 (-) True G359374
TU409927 other downstream 1065587 1890858 ~ 1893459 (-) True CI01000152_01892421_01893463
TU409694 other downstream 1615041 1337660 ~ 1344005 (-) True G359178

Expression Profile