RNA id: TU410675


Basic Information

Item Value
RNA id TU410675
length 341
lncRNA type intronic
GC content 0.38
exon number 1
gene id G360043
representative True

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2960785 ~ 2961125 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGGATGAGAGCAGAGGATTTTTCTTGAAACCCTCCTGAACAACTTGTGGTGATGTAGGTGCTGTTTGATATTTCTTTTTAGGCTTTCTTACAGCCACTTTCTATTTTGTGAAGCTCAACAATCTTTTGCTGCACATCAGAACTATATTCTTTGGTTTTACTCATTGTGATGAATGATTAAGGGAATTTGGCCTTTGTGTTTCCTCATGTTTATACTCCTGTGGAACAGGAAGTCATGGCTGGACAATTTCATGCTCCTAGTCACCCTGCTGTGCCAAAAAATGTAAATATGAATGGGAATATACTTCAGAAATATTTTACTCACAAGAATTTCTAGGGGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU410674 lncRNA downstream 566 2959824 ~ 2960219 (-) True G360042
TU410673 lncRNA downstream 1513 2959046 ~ 2959272 (-) True G360041
TU410658 lncRNA downstream 9834 2950604 ~ 2950951 (-) True G360026
TU410670 lncRNA downstream 22378 2937935 ~ 2938407 (-) True G360038
TU410669 lncRNA downstream 25283 2935268 ~ 2935502 (-) True G360037
TU410680 lncRNA upstream 13221 2974346 ~ 2974592 (-) True G360048
TU410681 lncRNA upstream 13721 2974846 ~ 2975083 (-) True G360049
TU410682 lncRNA upstream 14418 2975543 ~ 2975843 (-) True G360050
TU410684 lncRNA upstream 15682 2976807 ~ 2977217 (-) True G360052
TU410685 lncRNA upstream 21432 2982557 ~ 2982974 (-) True G360053
CI01000152_02440117_02451100.mRNA mRNA downstream 508963 2440117 ~ 2451822 (-) True CI01000152_02440117_02451100
CI01000152_02427978_02434593.mRNA mRNA downstream 526192 2427519 ~ 2434593 (-) True CI01000152_02427978_02434593
CI01000152_02334753_02345817.mRNA mRNA downstream 614968 2334168 ~ 2345817 (-) True CI01000152_02334753_02345817
CI01000152_02190690_02206511.mRNA mRNA downstream 754127 2190682 ~ 2206658 (-) True CI01000152_02190690_02206511
CI01000152_02086974_02089993.mRNA mRNA downstream 870735 2086488 ~ 2090050 (-) False CI01000152_02086974_02089993
TU410417 other downstream 500949 2368992 ~ 2459836 (-) True G359800
TU410397 other downstream 642051 2318268 ~ 2318734 (-) True G359788
TU409936 other downstream 935947 2024633 ~ 2024838 (-) True G359374
TU409927 other downstream 1067326 1890858 ~ 1893459 (-) True CI01000152_01892421_01893463
TU409694 other downstream 1616780 1337660 ~ 1344005 (-) True G359178

Expression Profile