RNA id: TU410687



Basic Information


Item Value
RNA id TU410687
length 277
lncRNA type intronic
GC content 0.52
exon number 1
gene id G360055
representative True

Chromosome Information


Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2985867 ~ 2986143 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGTGACTCGGGGGTTGTGAGAGTGGCGCGAGGCCGGTGGCATGACTGATAAGAGGCGCCACCTGCGTGCCGCACTGGTCTTGTATCTCACGGAGGAGCTCGGAATCATAAAAGGAGGAGTGATGACAGTGAAGGAGGAGAGAAGACCAGGCCTGGACTTTATGTTATGTTTATGTGTGTGCGGCAGTCGTCCGTGAGGGGCTGCCGCCTTTACTTTCGTTTTGTTGTTTGTTTATTTTGGAATTAAAGTTCCCGCCTCCATCTTCCCTGAGCTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU410686 lncRNA downstream 346 2984868 ~ 2985521 (-) True G360054
TU410685 lncRNA downstream 2893 2982557 ~ 2982974 (-) True G360053
TU410684 lncRNA downstream 8650 2976807 ~ 2977217 (-) True G360052
TU410682 lncRNA downstream 10024 2975543 ~ 2975843 (-) True G360050
TU410681 lncRNA downstream 10784 2974846 ~ 2975083 (-) True G360049
TU410688 lncRNA upstream 340 2986483 ~ 2986811 (-) True G360056
TU410690 lncRNA upstream 6003 2992146 ~ 2992388 (-) True G360058
TU410691 lncRNA upstream 10759 2996902 ~ 2997129 (-) True G360059
TU410699 lncRNA upstream 27750 3013893 ~ 3014287 (-) True G360067
TU410700 lncRNA upstream 31073 3017216 ~ 3017443 (-) True G360068
CI01000152_02440117_02451100.mRNA mRNA downstream 534045 2440117 ~ 2451822 (-) True CI01000152_02440117_02451100
CI01000152_02427978_02434593.mRNA mRNA downstream 551274 2427519 ~ 2434593 (-) True CI01000152_02427978_02434593
CI01000152_02334753_02345817.mRNA mRNA downstream 640050 2334168 ~ 2345817 (-) True CI01000152_02334753_02345817
CI01000152_02190690_02206511.mRNA mRNA downstream 779209 2190682 ~ 2206658 (-) True CI01000152_02190690_02206511
CI01000152_02086974_02089993.mRNA mRNA downstream 895817 2086488 ~ 2090050 (-) False CI01000152_02086974_02089993
TU410417 other downstream 526031 2368992 ~ 2459836 (-) True G359800
TU410397 other downstream 667133 2318268 ~ 2318734 (-) True G359788
TU409936 other downstream 961029 2024633 ~ 2024838 (-) True G359374
TU409927 other downstream 1092408 1890858 ~ 1893459 (-) True CI01000152_01892421_01893463
TU409694 other downstream 1641862 1337660 ~ 1344005 (-) True G359178

Expression Profile