RNA id: TU410708


Basic Information

Item Value
RNA id TU410708
length 1135
lncRNA type antisense_over
GC content 0.52
exon number 6
gene id G360074
representative False

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 3029318 ~ 3065869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAGAATGAGATGATGAAATGAAAGGCAATTACAAACGCTCAATACCTGTCTTTTCAATTATCTCAAGCAACAGTGCTAAACATGGCACCTATTATCTTCTGTTAAAATGAAGTGGTGAGTCTGATGTGCCTGGACAAAGTCTTACCAGTGAGCTGGTGTAGGTGGGGTCAGAGGTGTCTTCCTGCAGATAACGGGACAGGCCGAAGTCTGACACCTTGCACACGAGGTTGCTGTTCACCAGGATGTTACGGGCAGCCAGGTCTCGGTGGACGTAATTCATCTCCGACAGGTACTTCATCCCTGCGGCAATTCCCCTCAACATCCCCACCAGCTGGATCACCGTAAACTGCCCGTCGTTTTGCCTAAGGAAAGAGTCGAGCGCCCCGTTCTCCATGAACTCTGTGACGATCATGACTGGCCGGCTTTTGGTGACCACACCTTCAAGGCGAATGATGTTGGGGTGGTCAAACTGCCCCATGATTGATGCCTCAGACAGGAAGTCGCGTCTCTGCTTCTCAGAATAACCTGCCTTCAGTGTTTTGATGGCAACGTAGATCTCTCGTTTTCCAGGCAGTTTCAGTCGACCTTTATATACTTCCCCGAACTCACCTGCCCCAATAACTTCTTCAATCTTAACGGTGGAGACGTCTATCTCCTTGGCGAATTCCCTGACGGCTTCATTAGGATCTTCGTAGGTGAAGGGGTCGATGTAGATCTTCATCCCCGGAGAGCCTGGCAGGGTCGGGCAGCCCATGGGCGTGTGGCAGTTGGACAGATCTGGCCTCAAAGTGAGTTCTCTGCCAGTGCTGTAGTGCTGGAGTTTGTCACTATACACGGCCTCCTTATTGTAAGCTCGTTTCCTGCTACAGACTATAGATATGGCCACCAGAGACACGATGAAGACCACTCCAGCCGCGGCTGAGCCCGCAATCAGAGGCAACTGCTCCCTCAGCTCTGATTTATAGTCGTCATCTGTGAGGGTTTGGAAGCACATTTTGCTGCTGTATTTGCCGAAACCAGCAACAGTCCTGGCGCGGACCTGCATCACATACATGGTGCCTGGCCGTAATCCGTCCACACGAGCCGTGTTAGTCTGACTCCTCACCTGCGTGGAGTTTACCTCAGACAGCTCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU410702 lncRNA downstream 10888 3018171 ~ 3018430 (-) True G360070
TU410701 lncRNA downstream 11428 3017616 ~ 3017890 (-) True G360069
TU410700 lncRNA downstream 11875 3017216 ~ 3017443 (-) True G360068
TU410699 lncRNA downstream 15031 3013893 ~ 3014287 (-) True G360067
TU410691 lncRNA downstream 32189 2996902 ~ 2997129 (-) True G360059
TU410866 lncRNA upstream 121756 3171827 ~ 3172051 (-) True G360223
TU410982 lncRNA upstream 302613 3352684 ~ 3356085 (-) True G360332
CI01000152_02440117_02451100.mRNA mRNA downstream 577496 2440117 ~ 2451822 (-) True CI01000152_02440117_02451100
CI01000152_02427978_02434593.mRNA mRNA downstream 594725 2427519 ~ 2434593 (-) True CI01000152_02427978_02434593
CI01000152_02334753_02345817.mRNA mRNA downstream 683501 2334168 ~ 2345817 (-) True CI01000152_02334753_02345817
CI01000152_02190690_02206511.mRNA mRNA downstream 822660 2190682 ~ 2206658 (-) True CI01000152_02190690_02206511
CI01000152_02086974_02089993.mRNA mRNA downstream 939268 2086488 ~ 2090050 (-) False CI01000152_02086974_02089993
TU410417 other downstream 569482 2368992 ~ 2459836 (-) True G359800
TU410397 other downstream 710584 2318268 ~ 2318734 (-) True G359788
TU409936 other downstream 1004480 2024633 ~ 2024838 (-) True G359374
TU409927 other downstream 1135859 1890858 ~ 1893459 (-) True CI01000152_01892421_01893463
TU409694 other downstream 1685313 1337660 ~ 1344005 (-) True G359178

Expression Profile