RNA id: CI01000154_00028488_00030445.mRNA


Basic Information

Item Value
RNA id CI01000154_00028488_00030445.mRNA
length 451
RNA type mRNA
GC content 0.44
exon number 3
gene id CI01000154_00028488_00030445
representative True

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 28370 ~ 30445 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGGGCTTCTGCCTGATGAAGCGAAACGTCTGTCTCCTCCGGGGATCGTTAACAGAAATTCGGTGTGGCTCGGGCTGTGCGGCTGGGCGTCCGCGATGCTGCACAACAGCTTGAACCGCAGGCCTGCACTCAAAGCCGGTGTTCACCGCCAAGCACTATTCATAACCGTTGGATGGTTCATTGGCTATCATCTCACAAAGTATGAGAATTACAAATATGCCACATTGGACAGGGACATGAATGAGTACATGCGGCTGCATCCTGAGGAGTTTCAAGAAAAAGAACGGAAGACATTTGCTGAAATTGTGGAGCCATTTAATCCAATCCGTTGAATGGATTTAGTCGTCACAAGGAACATGAAGACTATAGTTGAAAATCTGGTTTAACAGGCTTTTCTGTTATAAATACTCTTATATTGATTTATCAAGTTGTGTAATCAATGTCATTAAA

Function

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K03968 NDUFC2; NADH dehydrogenase (ubiquinone) 1 subunit C2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU412257 lncRNA upstream 19796 50241 ~ 50667 (-) True G361488
TU412269 lncRNA upstream 100797 131242 ~ 131442 (-) True G361500
TU412288 lncRNA upstream 173769 204214 ~ 204493 (-) True G361519
TU412686 lncRNA upstream 268266 298711 ~ 299135 (-) True G361873
TU412687 lncRNA upstream 268751 299196 ~ 299418 (-) True G361874
CI01000154_00563885_00564103.mRNA mRNA upstream 533076 563521 ~ 564103 (-) True CI01000154_00563885_00564103
CI01000154_00594797_00604722.mRNA mRNA upstream 564269 594714 ~ 605354 (-) True CI01000154_00594797_00604722
CI01000154_00744348_00748552.mRNA mRNA upstream 713830 744275 ~ 748552 (-) True CI01000154_00744348_00748552
CI01000154_00756309_00761576.mRNA mRNA upstream 725384 755829 ~ 762316 (-) True CI01000154_00756309_00761576
CI01000154_00797516_00828865.mRNA mRNA upstream 766956 797401 ~ 828865 (-) True CI01000154_00797516_00828865
TU413215 other upstream 1501272 1531717 ~ 1549871 (-) False CI01000154_01524327_01555571

Expression Profile