RNA id: CI01000154_01524327_01555571.mRNA


Basic Information

Item Value
RNA id CI01000154_01524327_01555571.mRNA
length 4282
RNA type mRNA
GC content 0.44
exon number 9
gene id CI01000154_01524327_01555571
representative False

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1524267 ~ 1555647 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGCCCAACCTGAGGTTTCCAACGTCGCTATTCTCGACGCGATAAACAACCTGACCGCCATTAGGAGTGTTTTGGGATGCAGCTTAAGCAGAACACGGTTATGATCGCAGAACTGACAAAGGGCATGGAATTTAACGCAAAAGAGATCAAGGACTGTAAATCTGCATCCAGTAACCTTGGAAAAGAAATGTCTAAGATGACGAAGGAAAATGCGGAGCTGAAGGAGTGTGTTCAGGAGCTGGAGCGATATAAACGATGCTGGAATCTCAAGCTCCGTGGCCTAAAAGAGAAAACTGAAGAAAGAACAAGGGACGAGGTACTTGGGATCATGGCGCAGATCAATCCACAATGGTCCACAAAATTGGTGAGTATGGTGGATTCGGTACATCGCGTGGGAAAGAAGGAGGCAGGGTACAACCGACAGGTGGTCATCCAGTTCACCATGAGACATTACAGAGATGAATTCTGGCGCCTTACGAAGAATTCTTCAGTTTGCAAAGACTTGAACATCAGCTTCGCCGAGCACATCTTACCAGCGGACAGGGAGGCTAGAGCACTACTATGGCCGCAGATAAAGCAGGCAAGAGAAGCAGGTCATCGAGCCTATTTCAGGGGTCCATATGGCTTTGTCAATGGGAAAAGATTTTCTGCTGTTTGGATATGTGTAGACCTCTCCAAATTGAATGAGACAGTTCGCAGGGAAAAATACATCCTGCCATCAGTTGAACAGACGTTAGGAATGCTAGCCGGAGCACAGATTTTTAATGAGTGTCGTCTTCCCTTACATTTAAAAAAAAATGAGACTTTACAAGATGAAAACAAAAAGAAATCAGTGGACGTGCTGCTGACGAACCTCATTGTGGGGAATCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCTGATCTCGTCCCCTCTGAGTGTGTCCATCGAGTGACAGAGGTACGAGGCTTCAATGATCCACAGAAGGAGGAATACTTCAGGAAGAGAATCAGTGATCAGAGTCTGGCCAATACAATCATCTCACACCTGAAGTCATCAAGGAGCCTCTACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCAGCTGTTCTAGAGAAGATGATGAGTGAAGCAGAGAGTGGAGAGATTCCCAAGACTCTCACTCAAATGTACACACACTTCCTGATCCTTCAGACCAACATCAAACATGAGAAGGACTATGAGAAGAACGTGACAGATGAAGACATGATCCTCAAACTGGGGAAAGTGGCTTTTCAGCAGCTCATGAAAGGCAATGTGATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGTGACAGAAGCATCAGTGTACTCAGGATTGTGCACTCAGATCTTCAGAGAGGAGTTTGGCTGGTATCAGGGGAAAGTCTTCTGCTTTGTTCATCTGAGCATTCAGGAACATCTAGCAGCTCTATATGTGCACCTCTCCTTCACTAACAGCAACATAAATGTGTTTGACCAAATCACCAAACAGAGTTTGTGGTCTAAAGTTAAGGATTGGTTCCAACACAATTCATCAGAACATTTTTCATTATCTGAGCTGCATCAGAGAGCTGTGAATGAGGCTCTATGGAGTAAAAATGGACATCTGGACCTTTTCCTGCGTTTTTTTCTGGGTCTGTCAGTAAAGACTAATCAGATTCTCCTACAAAGACTAATGAAACATACAAGCATCAGATCTGACAGCAATGAGGAAACAGTTGAGTACATCAAGAAGAAGATCAGCACCATTGACTCTCCAGAGAAATTCATCAATCTGTTCCACTGTCTGAATGAACTGGGTGATCATTCACTAGTGGAGGAAATACAACAGTATCTGAAATCTGGAAGAATAAAGGAAACCAAACTCTCTTCATCTCAGTGGTCAGCTGTAGTCTTTGTGTTGATGACTTCAGAGAAGAAGCTGGATGAGTTTGATATTAATAAATTTGTTGGAGGAAACAATGAAACTGAAAAACTGAAAGTTTTTCAGAAGCTGCTGCCTGTGATTAAAGAATCCAGTTCAATTCAGCTGAGTAAGTGTGGTCTCACAAATAAAGGTTGCGCTGCTCTGGCTTCAGCTCTGAGATCAAACCCCTCACACTTAAGAGAACTGGATCTGTCTGGGAATGAACTAGGAAATTCAGGAGTCACACTGCTGTCTAATTTACTACAGAATCCACACTGTAAACTGGAGGAATTGTGGTTGATTGATTGTGGTGTCACAGATTGTGCTGCTCTGGCTTCAGCTCTGAGATCAAACCCCTCATACCTGAGAGTACTGGATCTGACTGGGAATAAACTAGAAGATTCAGCCGTGAAGCTTCTCTCTGCTTTACTGGCGAATCCTCAGTGTAAACTGGAGATACTGGGGTTGAGTGATTGTGGACTCTCAGATGAAGGTTGTGCTGCTCTGGCTTCAGCTCTGAGATCAAACCCCTCACACCTGAGAGCGCTATATCTAACTGAGAATAATCTAGGACAATCAGGATTGAGTTTGCTCTCTAAAATGAAGGATGATCCACATAATAAACTGGAGGTACGAGGCTTCAATGATCCACAGAAGGAGGAATACTTCAGGAAGAGAATCAGTGATCAGAGTCTGGCCAATACAATCATCTCACACCTGAAGTCATCAAGGAGCCTCTACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCGCTGTTCTAGAGAAGATGTTGAGCGAAGCAGAGAGTGGAGAGATTCCCAAGACTCTCACTCAAATGTACACACACTTCCTGATCCTTCAGACTGACATCAAACATGAGAAGGACTATGAGAAGAACGTGACAGATGAAGACATGATCCTCAAACTGGGGAAAGTGGCTTTTCATCAGCTTGTGAAAGGCAATGTGATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGTGACAGAAGCATCAGTGTACTCAGGATTGTGCACTCAGATCTTCAGAGAGGAGTTTGGCTGGTATCAGGGGAAAGTCTTCTGCTTTGTTCATCTGAGCGTTCAGGAACATCTAGCGGCTCTATATGTGCACCTCTCCTTCACTAACAGCAACATAAATGTGTTTGACCAAATCACCAAACAGAGTTTGTGGTCTAAAGTTATGGCCTGGTTTTATAATGTTTCATTATCTGATCTCCATCAGAGAGCTGTGAATGAGGCTCTACAGAGTAAAAATGGACATCTGGACCTTTTCCTGCGGTTTCTTCTGGGTCTGTCAGTGGAGTCTCAGCAGATTCTCCTACAAAGACTAATGAAACAGACAAGCATCAGATCTGACAGCAATGAGAAAACAGTTGAGTACATCAAGGAGAAGATCAGGACCATTGACTCTCCAGAGAAATCCATCAATCTGTTCCACTGTCTGAATGAACTGGGTGATCATTCACTAGTGGAGGAAATACAACAGTATCTGAAATCTGGAAGAATAAGAGAAGTCAAACTCTCTTCATCTCAGTGGTCAGCTGTAGTCTTTGTGTTGTTGACATCAGAGAAGAAGCTGGATGAGTTTGATATTAATACATTTGTTGGAGGAAACAACAACACTGAAAAACTGAAGATTCTTCAGAAGCTGCTGCCTGTGATTAAAGAATCCAGATCAATTCAGTTGAAGGATTGTGATCTCACAGATGAAGGTTGTGCTGCTCTGACTTCAGCTCTGAGATCAAACCCCTCACACCTGAGAGTACTGGATCTGTCTGGGAATAAAATAGGAAAATCAGTGAATCTGCTGTCTGATGTACTACAGGATCCTCACTGTAAACTGGAGAAACTATGTGAAGAGTGTGTCATTGTTCTCTACAAGTTGAAGGATTGTGATCTCACAGATGAAGGTTGTGCTGCTCTGGCTTCAGCTCTGAGATCAAACCCCTCACACCTGAGAGAACTGGATCTGACTGGGAATAAAATAGGAAAATCAGTGAATCTGCTGTCTGATGTACTACAGGATCCTCACTGTAAACTGGAGAAACTGCAGTTGATGTGTTGTGGTGTCACAGATAAAGGTTGTGCTGCTCTGACTTCAGCTCTGAGATCAAACCCCTCACACCTGAGACAACTGAATTTGTCTCAGAATAAACTAGGACAATCAGGAGTGAAGATGCTCTCTGATCTGAAGGATGATCCACATTATAAACTGGAGACATTGTACTATTGTGAGTATATTTTCATTTAAAGCCTTTAAATTGACAGTAAGTTCAGTAACATCCTCATATGTGTGTAACTGGAGAATATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU413097 lncRNA downstream 21370 1499887 ~ 1502897 (-) True G362252
TU413111 lncRNA downstream 33338 1442581 ~ 1490929 (-) True G362266
TU413112 lncRNA downstream 150294 1373677 ~ 1373973 (-) True G362267
TU413110 lncRNA downstream 178113 1345275 ~ 1346154 (-) True G362265
TU413179 lncRNA downstream 202289 1321672 ~ 1321978 (-) True G362324
CI01000154_01505317_01513821.mRNA mRNA downstream 10284 1505105 ~ 1513983 (-) True CI01000154_01505317_01513821
CI01000154_01465090_01466925.mRNA mRNA downstream 57161 1464632 ~ 1467106 (-) True CI01000154_01465090_01466925
CI01000154_01422783_01434121.mRNA mRNA downstream 90146 1421764 ~ 1434121 (-) True CI01000154_01422783_01434121
CI01000154_01411672_01413992.mRNA mRNA downstream 108809 1410982 ~ 1415458 (-) True CI01000154_01411672_01413992
CI01000154_01383482_01395024.mRNA mRNA downstream 128727 1382787 ~ 1395540 (-) True CI01000154_01383482_01395024
CI01000154_01576353_01594017.mRNA mRNA upstream 20647 1576294 ~ 1594017 (-) True CI01000154_01576353_01594017
CI01000154_01599881_01600510.mRNA mRNA upstream 43892 1599539 ~ 1600510 (-) True CI01000154_01599881_01600510

Expression Profile