RNA id: CI01000154_01599881_01600510.mRNA


Basic Information

Item Value
RNA id CI01000154_01599881_01600510.mRNA
length 872
RNA type mRNA
GC content 0.45
exon number 2
gene id CI01000154_01599881_01600510
representative True

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1599539 ~ 1600510 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGTGGACAGAGCACAACAAGAGTGACCTAATACTGGAACGATACTGGGCAGAATGTGCTCTCTTAACTGTACAGGATGACCTGTTGCTGAGAGGCACGAGGCTGGTCATTCCAGCTGCCATAAGAAACAGCATACTTAGCAAGTTGCATGAGGGGCACTTAGGACTTGTGAAATGCAGAGAGTGGGCAAGACAATCACTTCCCAACAGGCCCTTGCAAAGGCTAGGGGCAGATTTATTCATGCTGGGAACTAAAACGTGTCTGCTTGTGATGGATTACTATTCCAGCTATGTGGAGATTGCTCAGTTATCACCCACCAAGTCTACTGACGTCATTGTCCACATGAAGTCCATATTCACATGTCATGGAGTTCCAGAGATTCTGGTTACAGATAATGGACCACAATTCTCTGGACACTCATTTGCATTCTTTGCTGCTTCTTATGGATTTGTCTATGTTACTAGCAGTCCTAAGTTTCCCCAGAGCAATGGAGAGGCTGCTCTTCTCAAGAAAGCCAGTGACCCACCTTGATCTCCTGGTATATTGAGCTACCCCCTTGCAGAATGGGTACAGCCCAGCTCAGCTTCTTATGGGCAGAAGGTTGCAAACAACTGTGCCCACTCTCATCATTGCTAGACCCAGCACTCCCCGATACTGCTGCAATTTTCTCGAAAGATAAGGAAAGAAAGAGTGCAGATGCAGAGCATTTCAAGAAACATCATAGAGCTAGAATGCTTCCACTTCACAATTGTCTGGTTTCATCATTGCTACACAAAAGTTCAGCTTGACACACACATGAGGTTTTACACTGAAGAGAAGCTGAAAAGAAGTTTCAAACATGTATCAGGTCTCATCTGAAGAAAAAGAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU413221 lncRNA downstream 12269 1527910 ~ 1587270 (-) True G362358
TU413219 lncRNA downstream 53081 1541133 ~ 1541411 (-) True G362356
TU413097 lncRNA downstream 96642 1499887 ~ 1502897 (-) True G362252
TU413111 lncRNA downstream 108610 1442581 ~ 1490929 (-) True G362266
TU413112 lncRNA downstream 225566 1373677 ~ 1373973 (-) True G362267
CI01000154_01576353_01594017.mRNA mRNA downstream 5522 1576294 ~ 1594017 (-) True CI01000154_01576353_01594017
CI01000154_01524327_01555571.mRNA mRNA downstream 43892 1524267 ~ 1555647 (-) False CI01000154_01524327_01555571
CI01000154_01505317_01513821.mRNA mRNA downstream 85556 1505105 ~ 1513983 (-) True CI01000154_01505317_01513821
CI01000154_01465090_01466925.mRNA mRNA downstream 132433 1464632 ~ 1467106 (-) True CI01000154_01465090_01466925
CI01000154_01422783_01434121.mRNA mRNA downstream 165418 1421764 ~ 1434121 (-) True CI01000154_01422783_01434121
TU413215 other downstream 49668 1531717 ~ 1549871 (-) False CI01000154_01524327_01555571

Expression Profile