RNA id: TU412917



Basic Information


Item Value
RNA id TU412917
length 325
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G362082
representative True

Chromosome Information


Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 786185 ~ 786509 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTGGCTTAACTAGTATTTGTTATAAAAATACCAATGGAGTTATACAATTTTATTGCAGCACATGACTTTTCCAGGACAAGAAACCACACTTTCACAATTAAGCTATACAGTACTATATATCAATGTTTCCATTGCCATGGGAACCATGGTTCTTCTTCAAAACAAACAAATAAATATTAAATAAATAAATAAAAATCCCACTAATCTAGTGGTTCACACCAATAAGGGCTTTTCACACTTGAAATAGTTAACCCTTGGGTAATTCTAATCCCCTGGTAAACGGAATCCTGGGTTATCTTTATTCACGTTTCACACTGCTTTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU412896 lncRNA downstream 78231 707653 ~ 707954 (-) True G362064
TU412874 lncRNA downstream 107422 674142 ~ 678763 (-) True G362045
TU412821 lncRNA downstream 191738 594233 ~ 594447 (-) True G362003
TU412795 lncRNA downstream 192606 593029 ~ 593579 (-) True G361977
TU412817 lncRNA downstream 201351 584568 ~ 584834 (-) True G361999
TU412933 lncRNA upstream 50327 836836 ~ 837043 (-) True G362098
TU412948 lncRNA upstream 86911 873420 ~ 873714 (-) True G362111
TU412953 lncRNA upstream 92185 878694 ~ 878901 (-) True G362116
TU412954 lncRNA upstream 92632 879141 ~ 879413 (-) True G362117
TU412955 lncRNA upstream 93133 879642 ~ 879938 (-) True G362118
CI01000154_00756309_00761576.mRNA mRNA downstream 23869 755829 ~ 762316 (-) True CI01000154_00756309_00761576
CI01000154_00744348_00748552.mRNA mRNA downstream 37633 744275 ~ 748552 (-) True CI01000154_00744348_00748552
CI01000154_00594797_00604722.mRNA mRNA downstream 180831 594714 ~ 605354 (-) True CI01000154_00594797_00604722
CI01000154_00563885_00564103.mRNA mRNA downstream 222082 563521 ~ 564103 (-) True CI01000154_00563885_00564103
CI01000154_00028488_00030445.mRNA mRNA downstream 755740 28370 ~ 30445 (-) True CI01000154_00028488_00030445
CI01000154_00797516_00828865.mRNA mRNA upstream 10892 797401 ~ 828865 (-) True CI01000154_00797516_00828865
CI01000154_00847380_00859545.mRNA mRNA upstream 60273 846782 ~ 861632 (-) True CI01000154_00847380_00859545
CI01000154_00864988_00870719.mRNA mRNA upstream 78459 864968 ~ 871344 (-) True CI01000154_00864988_00870719
CI01000154_00982864_00992761.mRNA mRNA upstream 195354 981863 ~ 993528 (-) True CI01000154_00982864_00992761
CI01000154_01213994_01216752.mRNA mRNA upstream 426575 1213084 ~ 1216752 (-) True CI01000154_01213994_01216752
TU413215 other upstream 745208 1531717 ~ 1549871 (-) False CI01000154_01524327_01555571

Expression Profile