RNA id: TU413095


Basic Information

Item Value
RNA id TU413095
length 909
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G362250
representative True

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1247256 ~ 1248164 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCTGTACAAAATCTGACATTTTAATTAAATACTGCCAAACTCAGAAAGGTCAAGCGAATATCATTTTGTTCTCAGTTGATTTAAGTTTCATACTGTTACACGGCACAAAGCATTTCCTTTCTGTAGCTTCTCATTCAAACATCACACATACTATGATAAAGTGCTTTACTGTTTCACTTCTCTGGCCACCTATGGCACTCAAACAGAACAATTCTACACTCCTTCTGTCAGAGCATGCTGGGATACCTGCTGTTCTGTGCTGCTTTCTTTTCTCAGACTGTGACTATGTTCAGAATAGCACACTACTGTACTGTTTCTGTAGTATGTAGTATACTGCGCACAGTATGCAAATGTTTACATGGAATAAATGGATGACATTTGCCAATATGTGCAGTATACAACCAAAGCACTCACAATGCATTGTGCTTGACCTGACCTTCTGTTTCCAGAGTGACGAATGTATGAGTACAATCAGGTGCATTTTAATATTTACAAATGTCAAAATATATATTTACATTTAATATACATTTTACTTGAGACATTTTTATACAAACTGTGATTAAACAATTTTATATTTCCTTATTATTATCTTGTTGACATGATAACGAGCTAATTCATTAGTTTAACATACTACTGTTGTAAAAAAATTGCATTCTGTTGCCTTTGCATACTGTTTATATAAATAGTAAGCAGTGTACAGTATGCTAGTGTTCCATTCTGAACATAGCCTCTTATAAGCATCTGATGAACTTGCAATGCCCTCTGGGAAATGTAGGCACAAGGGTAGTGCATGTGTGGACACCTGATAGAATGAGGCTGTTGTATTTTCCAGCTCACCTATCCACCTTATTTTTCAACGCACAAGTAAGCTATATTTTCTGTCAATGTGAAGAGACTTGATAAATTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU413133 lncRNA downstream 77172 1165454 ~ 1170084 (-) False G362287
TU413132 lncRNA downstream 77172 1168215 ~ 1170084 (-) True G362287
TU413059 lncRNA downstream 159043 1087941 ~ 1088213 (-) True G362218
TU412994 lncRNA downstream 186506 996453 ~ 1060750 (-) True G362153
TU412986 lncRNA downstream 266305 980664 ~ 980951 (-) True G362148
TU413116 lncRNA upstream 28169 1276333 ~ 1277708 (-) True G362271
TU413102 lncRNA upstream 40853 1289017 ~ 1289723 (-) True G362257
TU413169 lncRNA upstream 54719 1302883 ~ 1303201 (-) True G362317
TU413179 lncRNA upstream 73508 1321672 ~ 1321978 (-) True G362324
TU413110 lncRNA upstream 91836 1345275 ~ 1346154 (-) True G362265
CI01000154_01213994_01216752.mRNA mRNA downstream 30504 1213084 ~ 1216752 (-) True CI01000154_01213994_01216752
CI01000154_00982864_00992761.mRNA mRNA downstream 253728 981863 ~ 993528 (-) True CI01000154_00982864_00992761
CI01000154_00864988_00870719.mRNA mRNA downstream 375912 864968 ~ 871344 (-) True CI01000154_00864988_00870719
CI01000154_00847380_00859545.mRNA mRNA downstream 385624 846782 ~ 861632 (-) True CI01000154_00847380_00859545
CI01000154_00797516_00828865.mRNA mRNA downstream 418391 797401 ~ 828865 (-) True CI01000154_00797516_00828865
CI01000154_01267269_01269079.mRNA mRNA upstream 18011 1266175 ~ 1269079 (-) True CI01000154_01267269_01269079
CI01000154_01303717_01309218.mRNA mRNA upstream 55275 1303439 ~ 1309285 (-) True CI01000154_01303717_01309218
CI01000154_01316706_01317237.mRNA mRNA upstream 68517 1316681 ~ 1317421 (-) True CI01000154_01316706_01317237
CI01000154_01338824_01343731.mRNA mRNA upstream 90572 1338736 ~ 1343884 (-) False CI01000154_01338824_01343731
CI01000154_01350180_01372314.mRNA mRNA upstream 101789 1349953 ~ 1372314 (-) True CI01000154_01350180_01372314
TU413215 other upstream 283553 1531717 ~ 1549871 (-) False CI01000154_01524327_01555571

Expression Profile