RNA id: TU413112


Basic Information

Item Value
RNA id TU413112
length 297
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G362267
representative True

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1373677 ~ 1373973 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGCCCCACTGATGCTCAATAGGGTTTAGGTCTGGAGACATTCTTTAGCAAGGCAGTGGTCATCTTGGAGGTGTGTTTGGGGTCGTTATCATGTTGGAATACTGCCCTGCGGCCCAGTCTCCAAAGGGAGGGGATCATGCTCTGCTTCAGTATGTCACAGTACATGTTGGCATTCATGGTTCCCTCAATGAACTGTAGCTCCCCAGTGCCGGCAGCACTCATGCAGCCCCAGACCATGACACTCCCACCACCATGCTTGACTGTAGGCAAGACACACTTGTCCCTGTACTCCTCACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU413110 lncRNA downstream 27523 1345275 ~ 1346154 (-) True G362265
TU413179 lncRNA downstream 51699 1321672 ~ 1321978 (-) True G362324
TU413169 lncRNA downstream 70476 1302883 ~ 1303201 (-) True G362317
TU413102 lncRNA downstream 83954 1289017 ~ 1289723 (-) True G362257
TU413116 lncRNA downstream 95969 1276333 ~ 1277708 (-) True G362271
TU413111 lncRNA upstream 68608 1442581 ~ 1490929 (-) True G362266
TU413097 lncRNA upstream 125914 1499887 ~ 1502897 (-) True G362252
TU413221 lncRNA upstream 153937 1527910 ~ 1587270 (-) True G362358
TU413219 lncRNA upstream 167160 1541133 ~ 1541411 (-) True G362356
CI01000154_01350180_01372314.mRNA mRNA downstream 1363 1349953 ~ 1372314 (-) True CI01000154_01350180_01372314
CI01000154_01338824_01343731.mRNA mRNA downstream 29793 1338736 ~ 1343884 (-) False CI01000154_01338824_01343731
CI01000154_01316706_01317237.mRNA mRNA downstream 56256 1316681 ~ 1317421 (-) True CI01000154_01316706_01317237
CI01000154_01303717_01309218.mRNA mRNA downstream 64392 1303439 ~ 1309285 (-) True CI01000154_01303717_01309218
CI01000154_01267269_01269079.mRNA mRNA downstream 104598 1266175 ~ 1269079 (-) True CI01000154_01267269_01269079
CI01000154_01374595_01375245.mRNA mRNA upstream 488 1374461 ~ 1376830 (-) True CI01000154_01374595_01375245
CI01000154_01383482_01395024.mRNA mRNA upstream 8814 1382787 ~ 1395540 (-) True CI01000154_01383482_01395024
CI01000154_01411672_01413992.mRNA mRNA upstream 37009 1410982 ~ 1415458 (-) True CI01000154_01411672_01413992
CI01000154_01422783_01434121.mRNA mRNA upstream 47791 1421764 ~ 1434121 (-) True CI01000154_01422783_01434121
CI01000154_01465090_01466925.mRNA mRNA upstream 90659 1464632 ~ 1467106 (-) True CI01000154_01465090_01466925
TU413215 other upstream 157744 1531717 ~ 1549871 (-) False CI01000154_01524327_01555571

Expression Profile