RNA id: TU415300



Basic Information


Item Value
RNA id TU415300
length 720
lncRNA type sense_over
GC content 0.46
exon number 1
gene id G364103
representative False

Chromosome Information


Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1452257 ~ 1501547 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACTAGTGTCAGTGAGCTGGCACGTTTTTCCTCAGCCTATAACCGTGTCTTTCCTCTCTGCCCACAGGAACTGCACCAGCACACAGTTATGTCAGAGCTCCACCCTCTCGCTGCCGTCCAATCAGAGCCTGCACATCAAATCCGAACCCGTCTCTCCTCCCCGAGACCGGGCGGGAGGCACTCCGGGCGGCTACGCTCATCCTCTGCCCCCTCCTCCGCCCCAGCCGGCGTCCCAGCAGGGTCAGCTACGGCAGGATGCGGGCCGCTCCCCGGTCGACAGCCTGAGCAGCTGCGGCAGCTCGTACGAGGGCAGCGACCGTGAGGAGCACCGAGCCGACTTCCATTCGCCCATGGGACTGCTGAGACCCTCTCAGGACGAGCGGCACAGCCCGTCCGTCAAGCGCATGCGTCTGTCCGAGGGCTGGGCCTCGTGATTGCGCGGCCTGTGCTGGCTTTTCTATGTGGAGATTTCACTTTAGTATTATTATATTTGTTTCTGCGGAGTGTGAGTGCTACATCAAGTATTAAAATTGATATATATATAAGATAAACAGGGGAGGGAGGGTGGGCGTGTTTGTGATTTGGGGTTGGGGTCAAGGGACATGCATTGCTTGTGCCACGTGTGGGGAAAAACTACAAAAAAAATACTAGTGCTGTCAAACGATTAATTGCGATTTATCACATTCAAAATAAAGGTTTGTGTTTACATAATAAATGTGTGTGTACTTTGTATATTTATGTACTTTATGTATTTATTATACATAATAAATATACACAGTACAATTAATGGTTTGACAGCACTAAAAAATACACATGCAATTTTACATACGTGTGTATGTATGTATACAAGCATACAGGATTAAAAAGAGAAGTCTGGTACTCTTGTTTGGTAAAGCTACTTTTTAGTTTCAGTAATATATTATGCATAATTAAACTATTAAAGGAGGCATTGACGTGTCTCAGGGCTTGTACAAGTAATATTCCCGTACAGACCGGGGCCTTTACGCTCACGTCAATGCGCACTAACTTGCAAATGTATGTTATCACAGACGTTGTTGTGTTGCAGGTTCAACGTATTTATGTAAATAGAGAACGATGAGGCTTTTGGGTAAACGGACCTGCCAGGATTTGCAGGTTTATTTGCGATTAACGGAGTGAGAGAGAAAGCCATCACGCACCAGTTTAAGACTACACGGGCCCAGGGCTGAGGAATTAATGGACGCGATTTACAATTCTAAATGGAATCGGGAAGTGTTCCAAATACACAGATTCTCTTGTAAATGTTGTTGATATTTCAGAGCCGTGTTAACAACGTTAAAGTTCTCTGGGCCATGTATTGCCTGTCCCCGGTGGAAGAGATGTACAATACATTTTGCTTATATTTTCATAAAAATGCAGAGCATTTGTTGCTACCTGTTGACCACATGAGTCAGAATGTGATTTCAAGCTTTGCCGATGTTGAACAGAGAGGTAAAGCCGTGTGAGCTCCAAAAATAAAGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU415313 lncRNA downstream 4452 1426023 ~ 1447805 (-) True G364112
TU415317 lncRNA downstream 14777 1358156 ~ 1437480 (-) True G364116
TU415316 lncRNA downstream 18091 1358463 ~ 1434166 (-) True G364115
TU415265 lncRNA downstream 116322 1254047 ~ 1335935 (-) True G364076
TU415133 lncRNA downstream 185674 1261130 ~ 1266583 (-) True G363957
TU415402 lncRNA upstream 212121 1665930 ~ 1666140 (-) True G364200
TU415309 lncRNA upstream 215581 1669390 ~ 1671108 (-) False G364109
TU415310 lncRNA upstream 215623 1669432 ~ 1671108 (-) False G364109
TU415308 lncRNA upstream 215643 1669452 ~ 1671108 (-) True G364109
TU415433 lncRNA upstream 325401 1779210 ~ 1789155 (-) False G364229
CI01000158_01410134_01419385.mRNA mRNA downstream 32592 1409995 ~ 1419665 (-) True CI01000158_01410134_01419385
CI01000158_01366017_01386733.mRNA mRNA downstream 65524 1365460 ~ 1386733 (-) True CI01000158_01366017_01386733
CI01000158_01341073_01343685.mRNA mRNA downstream 108222 1341073 ~ 1344035 (-) True CI01000158_01341073_01343685
CI01000158_01339302_01340074.mRNA mRNA downstream 112183 1339236 ~ 1340074 (-) True CI01000158_01339302_01340074
CI01000158_01262724_01264911.mRNA mRNA downstream 187346 1262005 ~ 1264911 (-) False CI01000158_01262724_01264911
CI01000158_01487198_01495799.mRNA mRNA upstream 32980 1486789 ~ 1495906 (-) False CI01000158_01487198_01495799
CI01000158_01534561_01537689.mRNA mRNA upstream 80663 1534472 ~ 1538085 (-) True CI01000158_01534561_01537689
CI01000158_01561252_01564385.mRNA mRNA upstream 107443 1561252 ~ 1564563 (-) True CI01000158_01561252_01564385
CI01000158_01595127_01599555.mRNA mRNA upstream 141151 1594960 ~ 1600310 (-) True CI01000158_01595127_01599555
CI01000158_01602975_01638158.mRNA mRNA upstream 149113 1602922 ~ 1638158 (-) True CI01000158_01602975_01638158
TU414877 other downstream 729745 722381 ~ 722512 (-) True G363734
TU414879 other downstream 1136868 314404 ~ 315389 (-) True G363736
TU415299 other upstream 2325 1479208 ~ 1501547 (-) True G364103
TU415405 other upstream 234157 1687966 ~ 1688828 (-) True G364203

Expression Profile