RNA id: TU415209


Basic Information

Item Value
RNA id TU415209
length 255
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G364030
representative True

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1043002 ~ 1043256 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCCTTCTTTCTTCAGTCGAAAAGAAATTAAGGTTTTTGTTGTGAACATTCCAGGATTATTCTCAAAGGGCTTTAAATGATACCAGAAAAGGAATAACGGTCTTATCTAGTGAAACGATCTGTCATTTTCTAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGATATACGTTTTAACCATAGACGCTCGTCTTGAACTAGCCCTTTTCTTCTTCTTCTCTATTAGAATTCCAGCAGTGTAGATGCTGCTAAGTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU415139 lncRNA downstream 46921 995019 ~ 996081 (-) True G363963
TU415193 lncRNA downstream 63434 979337 ~ 979568 (-) True G364015
TU415189 lncRNA downstream 74353 968428 ~ 968649 (-) True G364011
TU415188 lncRNA downstream 75945 966820 ~ 967057 (-) True G364010
TU415182 lncRNA downstream 91982 950802 ~ 951020 (-) True G364004
TU415148 lncRNA upstream 161596 1204852 ~ 1214069 (-) True G363972
TU415265 lncRNA upstream 210791 1254047 ~ 1335935 (-) True G364076
TU415133 lncRNA upstream 217874 1261130 ~ 1266583 (-) True G363957
TU415317 lncRNA upstream 314900 1358156 ~ 1437480 (-) True G364116
TU415316 lncRNA upstream 315207 1358463 ~ 1434166 (-) True G364115
CI01000158_01023714_01028130.mRNA mRNA downstream 14848 1023346 ~ 1028154 (-) True CI01000158_01023714_01028130
CI01000158_01015366_01021562.mRNA mRNA downstream 21440 1015295 ~ 1021562 (-) True CI01000158_01015366_01021562
CI01000158_00996425_01012543.mRNA mRNA downstream 29753 996322 ~ 1013249 (-) True CI01000158_00996425_01012543
CI01000158_00964222_00966170.mRNA mRNA downstream 76832 962628 ~ 966170 (-) True CI01000158_00964222_00966170
CI01000158_00944536_00948113.mRNA mRNA downstream 94889 943955 ~ 948113 (-) True CI01000158_00944536_00948113
CI01000158_01103049_01104386.mRNA mRNA upstream 59540 1102796 ~ 1104474 (-) True CI01000158_01103049_01104386
CI01000158_01106641_01108816.mRNA mRNA upstream 63306 1106562 ~ 1108816 (-) True CI01000158_01106641_01108816
CI01000158_01116779_01131501.mRNA mRNA upstream 73472 1116728 ~ 1131677 (-) True CI01000158_01116779_01131501
CI01000158_01192157_01194797.mRNA mRNA upstream 148888 1192144 ~ 1194797 (-) True CI01000158_01192157_01194797
CI01000158_01247736_01251443.mRNA mRNA upstream 204303 1247559 ~ 1251458 (-) True CI01000158_01247736_01251443
TU414877 other downstream 320490 722381 ~ 722512 (-) True G363734
TU414879 other downstream 727613 314404 ~ 315389 (-) True G363736
TU415299 other upstream 412878 1479208 ~ 1501547 (-) True G364103
TU415405 other upstream 644710 1687966 ~ 1688828 (-) True G364203

Expression Profile