RNA id: TCONS_00018492


Basic Information

Item Value
RNA id TCONS_00018492
length 516
RNA type mRNA
GC content 0.50
exon number 4
gene id XLOC_009402
representative False

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 35226673 ~ 35252548 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTCGGTCAGCGAGAACGCAGGTGTGCATCACAATGGCCCGCTCGCAAGAAACGACTCTGCCAAGCCATCTCTTAGAGGGGGTTCAACCCTCTCTAACCCCCAGCATGACACCAGGTTTGCGCTGGCCACGCTGGACTCCACTCTCGAGGGAGGAACGGATGACATGGCTGTTGTGGACGCAACCTCTCTACGCAGACAGATTGTCAAGTTGAACCGCCGTTTGCAGCTCTTGGAGGAGGAGAACAAAGAGCGAGCCAAGCGAGAAATGGTCATGTACTCCATCACTGTAGCTTTCTGGCTCGTCAACAGCTGGGTTTGGTTCCGACGCTAAAGCTTTAGAGACTCCACTGAGTGGGAGGGGCTACAACAAAACCCCGCCCCTCCTGTTATATGTGTCAAATTTTAGCCATGCTTTATAATGGCTccaaaaaagttgttgttttcttCACAGCAAGAGCAGTAAAGTCAGGGATAGCTTTCTATGTTTGGAATTgtctgtctgattttttttttttt

Function

GO: NA

KEGG:

id description
ko03029 Mitochondrial biogenesis

Ensembl:

ensembl_id ENSDART00000131479

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019211 lncRNA downstream 558827 34658881 ~ 34668392 (-) True XLOC_009390
TCONS_00018836 lncRNA downstream 619813 34602522 ~ 34607406 (-) True XLOC_009389
TCONS_00018835 lncRNA downstream 748771 34468383 ~ 34478448 (-) True XLOC_009385
TCONS_00018440 lncRNA downstream 1262308 33957926 ~ 33964911 (-) True XLOC_009379
TCONS_00018427 lncRNA downstream 1339552 33879353 ~ 33887667 (-) True XLOC_009376
TCONS_00018496 lncRNA upstream 167724 35414466 ~ 35661368 (-) False XLOC_009404
TCONS_00018837 lncRNA upstream 169882 35416624 ~ 35661131 (-) False XLOC_009404
TCONS_00019212 lncRNA upstream 171762 35418504 ~ 35421844 (-) False XLOC_009404
TCONS_00019213 lncRNA upstream 171762 35418504 ~ 35422791 (-) True XLOC_009404
TCONS_00018497 lncRNA upstream 193998 35440740 ~ 35468800 (-) True XLOC_009405
TCONS_00018490 mRNA downstream 2738 35214546 ~ 35224481 (-) True XLOC_009401
TCONS_00018489 mRNA downstream 3046 35214546 ~ 35224173 (-) False XLOC_009401
TCONS_00018487 mRNA downstream 14757 35156414 ~ 35212462 (-) False XLOC_009400
TCONS_00018486 mRNA downstream 92301 35130621 ~ 35134918 (-) True XLOC_009399
TCONS_00018485 mRNA downstream 100887 35115332 ~ 35126332 (-) True XLOC_009398
TCONS_00018494 mRNA upstream 126165 35372907 ~ 35406564 (-) False XLOC_009403
TCONS_00018495 mRNA upstream 156338 35403080 ~ 35410860 (-) True XLOC_009403
TCONS_00018499 mRNA upstream 641807 35888549 ~ 35930070 (-) True XLOC_009409
TCONS_00018500 mRNA upstream 705146 35951888 ~ 36055401 (-) False XLOC_009410
TCONS_00018501 mRNA upstream 710100 35956842 ~ 35960250 (-) True XLOC_009410
TCONS_00018488 other downstream 14982 35167295 ~ 35212237 (-) True XLOC_009400
TCONS_00018481 other downstream 114433 35095205 ~ 35112786 (-) False XLOC_009398
TCONS_00018452 other downstream 947684 34279421 ~ 34279535 (-) True XLOC_009383
TCONS_00018421 other downstream 1493113 33706680 ~ 33734106 (-) True XLOC_009372
TCONS_00018418 other downstream 1564047 33663055 ~ 33663172 (-) True XLOC_009370
TCONS_00018513 other upstream 1282723 36529465 ~ 36533247 (-) True XLOC_009417
TCONS_00018517 other upstream 1627509 36874251 ~ 36874366 (-) True XLOC_009420
TCONS_00018535 other upstream 2481092 37727834 ~ 37729166 (-) True XLOC_009432
TCONS_00018590 other upstream 4822269 40069011 ~ 40069127 (-) True XLOC_009467
TCONS_00018622 other upstream 6146659 41393401 ~ 41396073 (-) True XLOC_009478

Expression Profile

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