RNA id: CI01000176_00007025_00017149.mRNA


Basic Information

Item Value
RNA id CI01000176_00007025_00017149.mRNA
length 1109
RNA type mRNA
GC content 0.41
exon number 5
gene id CI01000176_00007025_00017149
representative True

Chromosome Information

Item Value
chromosome id CI01000176
NCBI id null
chromosome length 156485
location 6744 ~ 17299 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGTGATTAATGATATTACTCTTCACATAAGCACAAGCACACAAACAAAAATACATACATAAAACCAATATGATATGTGGTTTGGAAACACTGCAGCTTTTTTCCACACGGTGTTCAACGTCTATTGTAGCTGCTGTGGTTTTGTCTGCATATGAGCAACTTTCCTTTCAGTTTCCTGCTTCACACGCTGTTGCTGTTGTTTATTGAAGCTCTTTTGATGTTGAGCATGAAAGCGCAGATGGATGTGATCTGCTGTAAATCAGTAGGAACTGATCTGTCCATGCTGGATATTGAGGATTTCATCAGTGAAATCTGTCAGCTGAAGAAAGAGGTGGCGTCACTGGAGGCAAAGCTGAGAGAAAGAGGAGACAAACCCAACAGAGAGGATCTGGAGAAGGTTTCAGTGTGTGTGACTGACGGGACAGAAGCTCAGGATTCAGTCTGGAGATCCAGAGACACACAGGACTCAGAGCTCAGCCTCACTTTACTGTGTTATACTGACGCTCAGGATCATGGATCCGCTGATCAAACCTCTGACTATGACAACGATGGTTCATCTTCTGATGGAGAAACCGCCTCTACATCCAAAGAGCGACGGACAAGGAAGAGTTTCTCCTGTAGAAAAACATTCAGCAAACAGGAAAATTTTGTGAGGCATGAGAGAAAAAACACAGAACAGAAAGAGCACAAGAAGAAAACGTTTCGTTGTAATCTGCATATTGGATTAAAGTGTGTTTATGAGGTATTTGATCACACTGATGGAATGACAAGGCCTAATTCTTTTAGCGGTTATTTAATACTTACTGAAAAACATAATGGCGTGAAATGAGGCTTCTTTCCCTCAGTCACTTTGATACACAAAACTGAAATGATCCAGACATGGATATGTTCTAAGGTCACACCGTCAGTTTTTGGGATCGACAATTGCATTTGCTTACAGGTGTGAATCTACTTTCATGTGTGAGTCTAATCAGCTTACAGTAGCGCCTCAAATGCTGTCTGTACGAACAAGCAATGGGAGTCAAGTCCGTATTTATTTACAAGTAACCATATAGCGACAGTGACAAAAGTAATATCTCAGCATACAATAATGCAGTGTAATGCAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU426874 lncRNA upstream 14448 31747 ~ 43887 (-) False G373722
TU426878 lncRNA upstream 14448 31747 ~ 46949 (-) False G373722
TU426882 lncRNA upstream 14448 31747 ~ 36542 (-) False G373722
TU426885 lncRNA upstream 14448 31747 ~ 42773 (-) False G373722
TU426880 lncRNA upstream 20364 37663 ~ 46949 (-) True G373722
CI01000176_00062378_00087326.mRNA mRNA upstream 45001 62300 ~ 88846 (-) False CI01000176_00062378_00087326
TU426886 other upstream 14448 31747 ~ 48881 (-) False G373722
TU426905 other upstream 37658 54957 ~ 65835 (-) True G373731
TU426896 other upstream 44780 62079 ~ 62201 (-) False G373724
TU426897 other upstream 44780 62079 ~ 63067 (-) False G373724
TU426898 other upstream 44780 62079 ~ 85063 (-) True G373724

Expression Profile