Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018538 |
| length | 1020 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 2 |
| gene id | XLOC_009435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 37751113 ~ 37752236 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007200 | phospholipase C-activating G protein-coupled receptor signaling pathway | biological_process |
| GO:0007204 | positive regulation of cytosolic calcium ion concentration | biological_process |
| GO:0006954 | inflammatory response | biological_process |
| GO:0002430 | complement receptor mediated signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004875 | complement receptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-131121-596 | Predicted to enable G protein-coupled receptor activity and complement receptor activity. Predicted to be involved in several processes, including complement receptor mediated signaling pathway; phospholipase C-activating G protein-coupled receptor signaling pathway; and positive regulation of cytosolic calcium ion concentration. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. |
| ensembl_id | ENSDART00000154263 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019219 | lncRNA | downstream | 17238 | 37731055 ~ 37733875 (-) | True | XLOC_009433 |
| TCONS_00018519 | lncRNA | downstream | 486848 | 37259354 ~ 37264265 (-) | True | XLOC_009422 |
| TCONS_00018840 | lncRNA | downstream | 966340 | 36784479 ~ 36784773 (-) | True | XLOC_009419 |
| TCONS_00019218 | lncRNA | downstream | 1247924 | 36500206 ~ 36503189 (-) | True | XLOC_009416 |
| TCONS_00018839 | lncRNA | downstream | 1313267 | 36421591 ~ 36437846 (-) | True | XLOC_009415 |
| TCONS_00018545 | lncRNA | upstream | 75149 | 37827385 ~ 37829157 (-) | True | XLOC_009441 |
| TCONS_00018553 | lncRNA | upstream | 124480 | 37876716 ~ 37880887 (-) | False | XLOC_009444 |
| TCONS_00018552 | lncRNA | upstream | 124480 | 37876716 ~ 37880887 (-) | True | XLOC_009444 |
| TCONS_00019220 | lncRNA | upstream | 543921 | 38296157 ~ 38297734 (-) | True | XLOC_009453 |
| TCONS_00018841 | lncRNA | upstream | 673312 | 38425548 ~ 38425845 (-) | True | XLOC_009455 |
| TCONS_00018537 | mRNA | downstream | 7500 | 37741382 ~ 37743613 (-) | True | XLOC_009434 |
| TCONS_00018536 | mRNA | downstream | 17875 | 37731055 ~ 37733238 (-) | False | XLOC_009433 |
| TCONS_00018532 | mRNA | downstream | 31434 | 37707269 ~ 37719679 (-) | False | XLOC_009431 |
| TCONS_00018534 | mRNA | downstream | 32098 | 37717259 ~ 37719015 (-) | True | XLOC_009431 |
| TCONS_00018533 | mRNA | downstream | 42041 | 37707914 ~ 37709072 (-) | False | XLOC_009431 |
| TCONS_00018539 | mRNA | upstream | 13861 | 37766097 ~ 37767901 (-) | True | XLOC_009436 |
| TCONS_00018540 | mRNA | upstream | 20890 | 37773126 ~ 37774544 (-) | True | XLOC_009437 |
| TCONS_00018541 | mRNA | upstream | 26338 | 37778574 ~ 37779978 (-) | True | XLOC_009438 |
| TCONS_00018542 | mRNA | upstream | 43050 | 37795286 ~ 37799496 (-) | True | XLOC_009439 |
| TCONS_00018543 | mRNA | upstream | 53875 | 37806111 ~ 37807023 (-) | True | XLOC_009440 |
| TCONS_00018535 | other | downstream | 21947 | 37727834 ~ 37729166 (-) | True | XLOC_009432 |
| TCONS_00018517 | other | downstream | 876747 | 36874251 ~ 36874366 (-) | True | XLOC_009420 |
| TCONS_00018513 | other | downstream | 1217866 | 36529465 ~ 36533247 (-) | True | XLOC_009417 |
| TCONS_00018488 | other | downstream | 2538876 | 35167295 ~ 35212237 (-) | True | XLOC_009400 |
| TCONS_00018481 | other | downstream | 2638327 | 35095205 ~ 35112786 (-) | False | XLOC_009398 |
| TCONS_00018590 | other | upstream | 2316775 | 40069011 ~ 40069127 (-) | True | XLOC_009467 |
| TCONS_00018622 | other | upstream | 3641165 | 41393401 ~ 41396073 (-) | True | XLOC_009478 |
| TCONS_00018633 | other | upstream | 3777024 | 41529260 ~ 41543440 (-) | True | XLOC_009482 |
| TCONS_00018660 | other | upstream | 4525437 | 42277673 ~ 42283815 (-) | True | XLOC_009502 |
| TCONS_00018661 | other | upstream | 4776554 | 42528790 ~ 42528904 (-) | True | XLOC_009503 |
