RNA id: CI01000186_00259516_00260745.mRNA



Basic Information


Item Value
RNA id CI01000186_00259516_00260745.mRNA
length 1312
RNA type mRNA
GC content 0.47
exon number 4
gene id CI01000186_00259516_00260745
representative True

Chromosome Information


Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 259416 ~ 261189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGATTCACACTCAAAGGAGCTGATTCAGTTCATATTCAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAATTGAATCAGTTTAGATTCACACTCAAAGGAGCTGATTCAGTTCATATATTCACACTCAAATGAACTGATTCAGTTCATATTCATATTCAAAGGAGCTGATTCAGTTCATATTCACACTTAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAACTGATTCAGTTCATATTTACACAAAGGAGCTGATTCAGTTCATATTTACACTCAAATGAACTGATTCAGTTCATATTCACACTCAAATGAACTGATTCAGTTCATATTCACACCTAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAACTGAATCAGTTCAGATTCACGCTCAAATAACCTGATTCAGTTCAGATTTATACTCAAAAATGCTGATTCAGTTCAGATTCACACTCAGAGGAGCTGATTGTTCAGTTCTGAATTCTGCTCAAGCTTCAATTTTATCTCTTGACGTCTGTATGTTTGTGTTTGTGCACCTCTGGGCGCAGCTGGGTTTCCCAGGATTCCCTGCTGCCGCGTGGAGGTTTTGTTTTGGTTTTGTGAAGTTTGTGATGAGACGCTGCGGGTTAATCTCTCCCTCTGATTCCAGACGTTACTTACCTGTCCTCCGAGATTTTCCAGCCAAGTTCATCTACGACCCCTGGAACGCGCCGGAAGATGTGCAGCTCGCCGCCAAATGCGTGATCGGAGTGGACTATCCCAAACCGATGGTGAACCACGCGGAGGCCAGTCGCCTGAACATCGAGAGGATGAGGCAGATCTACCAGCAGCTGTCCAGATACCGCGGACTCAGTAAGAGCGCGTTCAACCTCACCGTTTACAAAGTTCTCCATTTTCTCCTTCTCATTTTCGTTCAACCCTCAGGTCTTCTCGCCACCGTTCCGTCCAACCACATGGAGGATGTGAGTGTAAATGAAGCCCGAGGGTCAGCAGTGCCCCGGAGGATGCAGAGCAGCGTGACGTCTCACCGGGTCAGGAGAGAGCAGTCCAGACCGGCCGGAGCGAAACATCGTGGCGCGAGATACCGACACTCCCTTGGCCACCGTACGTCGCCCTACACCGCCCAGAGTGACCTGACGAACCACGGCCATGAGTTTGCCGTCCCACAACAACCGGAAGAGGCGGGAAGATGCTGAGGGCGTGGCCTCCTCATCCTAAGCCCCACCCACTGATGGATTCGTAAAATGTATCGTAAATTTCCTCACGTGTTAAACACTAACATTCAGAGTAATTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU432559 lncRNA downstream 18345 240855 ~ 241071 (-) True G378399
TU432648 lncRNA downstream 43373 215782 ~ 216043 (-) True G378476
TU432620 lncRNA downstream 139248 119741 ~ 120168 (-) True G378456
TU432621 lncRNA downstream 141097 117796 ~ 118319 (-) True G378457
TU432618 lncRNA downstream 142546 114368 ~ 116870 (-) True G378455
TU432658 lncRNA upstream 39697 300886 ~ 301234 (-) True G378480
TU432659 lncRNA upstream 41022 302211 ~ 302489 (-) True G378481
TU432660 lncRNA upstream 61340 322529 ~ 322781 (-) True G378482
TU432695 lncRNA upstream 183199 444388 ~ 444877 (-) True G378517
TU432698 lncRNA upstream 186920 448109 ~ 448422 (-) True G378520
CI01000186_00240507_00248051.mRNA mRNA downstream 11365 240329 ~ 248051 (-) False CI01000186_00240507_00248051
CI01000186_00238503_00238674.mRNA mRNA downstream 20742 238470 ~ 238674 (-) False CI01000186_00238503_00238674
CI01000186_00215443_00223579.mRNA mRNA downstream 35837 215399 ~ 223579 (-) False CI01000186_00215443_00223579
CI01000186_00175457_00185420.mRNA mRNA downstream 73996 175199 ~ 185420 (-) True CI01000186_00175457_00185420
CI01000186_00165206_00167364.mRNA mRNA downstream 91957 165042 ~ 167459 (-) True CI01000186_00165206_00167364
CI01000186_00261713_00270433.mRNA mRNA upstream 234 261423 ~ 270510 (-) True CI01000186_00261713_00270433
CI01000186_00281889_00289711.mRNA mRNA upstream 19723 280912 ~ 290480 (-) True CI01000186_00281889_00289711
CI01000186_00304422_00316712.mRNA mRNA upstream 43129 304318 ~ 316863 (-) True CI01000186_00304422_00316712
CI01000186_00318098_00318475.mRNA mRNA upstream 56539 317728 ~ 318475 (-) True CI01000186_00318098_00318475
CI01000186_00340443_00342720.mRNA mRNA upstream 79082 340271 ~ 342966 (-) True CI01000186_00340443_00342720
TU432581 other downstream 11332 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432571 other downstream 35652 217476 ~ 217536 (-) True G378411
TU432635 other downstream 65656 192170 ~ 193760 (-) True G378466
TU432622 other downstream 137991 120682 ~ 121425 (-) True G378458
TU432596 other upstream 99721 360910 ~ 366991 (-) True CI01000186_00360860_00361637
TU432687 other upstream 135069 396258 ~ 396755 (-) True G378509
TU432574 other upstream 224607 488357 ~ 488483 (-) True G378414

Expression Profile